Actinoplanes oblitus: ACTOB_002602
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Entry
ACTOB_002602 CDS
T09687
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aou
Actinoplanes oblitus
Pathway
aou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACTOB_002602 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aou03019
]
ACTOB_002602 (recQ)
03400 DNA repair and recombination proteins [BR:
aou03400
]
ACTOB_002602 (recQ)
Enzymes [BR:
aou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACTOB_002602 (recQ)
Messenger RNA biogenesis [BR:
aou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACTOB_002602 (recQ)
DNA repair and recombination proteins [BR:
aou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACTOB_002602 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
WIM98974
LinkDB
All DBs
Position
complement(2908731..2910743)
Genome browser
AA seq
670 aa
AA seq
DB search
MTSAPPVPVSSATDALNRIFGYPEFRGQQREIVEHVIDGGDALVLMPTGGGKSLCYQIPA
LVRPGTGVVISPLIALMQDQVDALRTLGVRANFLNSTQDLDERRLVEAEFVAGELDLLYV
APEGLGTPGVQRLLDRGKISLFAIDEAHCVSQWGHDFRPDYLALSMLHERWPDVPRIALT
ATATTATRDEIASRLRLTEARHFTASFDRPNIQYRIVPKNEPKRQLLDLLRTEHPGDAGI
VYCLSRASVDKHAEFLTQNGIPALPYHAGLDPRTRARNQARFLREEGLVMVATIAFGMGI
DKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIDSSEGDLA
FRRNAARHLEAMLALCETVSCRRGQLLAYFDQEAPAASCGNCDTCLTPPESWDGTVAAQK
LLSTVFRLKKERNQKFGAGQAIDILLGKRTDKVVQFRHDQLSVFGIGTELRDTEWRGVVR
QLLAGGYLAVEGEYSTLVLTERSTTILRGEATVMMRREIPAQRLRAGSRGSSSSSSSRAA
AVAPADFPAEAEPLFERLRAWRAATAKEQSVPPYVIFHDKTLRAIAVLSPTTLDQLGTVS
GVGQSKLTKFGDDVLSVIRGDDPAEAGASAADAASDSPGSLSYARDDDQPADDLFPPPEE
PYDYYDGPEE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcggctccccccgttcccgtgtccagtgccaccgacgcgctcaaccgcatcttc
ggttaccccgagttccgcgggcagcagcgcgagatcgtcgagcacgtgatcgacggtggc
gacgccctcgtcctgatgcccaccggcggcggcaagtcgctgtgctaccagattccggcg
ctggtccggccgggcaccggcgtggtgatctcgccgctgatcgccctgatgcaggaccag
gtcgacgcgctgcgcaccctcggcgtccgggcgaacttcctgaattcgacccaggacctc
gacgagcgccgcctggtcgaggccgagttcgtcgccggtgagctcgacctgctctacgtg
gcgcccgagggcctcggcacgccgggcgtgcagcggctgctcgaccggggcaagatctcg
ctgttcgccatcgacgaggcgcactgcgtgtcgcagtggggtcacgacttccggcccgac
tatctggccctgtcgatgctgcacgagcgctggccggacgtgccgcggatcgcgctgacc
gccaccgcgaccaccgccacccgcgacgagatcgcgtcccggctgcgactcaccgaggcg
cggcacttcaccgccagcttcgaccggcccaacatccagtatcggatcgttccgaaaaac
gagccgaaacggcagctgctcgacctgctgcgcaccgagcacccgggcgacgccgggatc
gtctactgcctgtcccgggcgtcggtggacaaacacgccgagttcctcacccagaacggg
attcccgcgctgccctatcacgccggcctcgacccgcggacccgggcgcgcaaccaggcc
cgtttcctgcgcgaggagggcctggtgatggtcgcgacgatcgccttcgggatgggcatc
gacaagccggacgtgcggttcgtggcccacctggacctgccgaaatccgtggagggctac
taccaggagaccgggcgggccggccgcgacgggctcccgtcgacggcctggctggcgtac
gggctgcaggacgtggtgcagcagcgcaagatgatcgacagctcggagggtgatctcgcg
ttccgccgcaacgcggcccggcatctggaggcgatgctcgccctgtgcgagacggtttcc
tgtcgccgggggcagctgctggcgtatttcgatcaggaggcgccggccgcgtcgtgcggc
aactgcgacacctgtctgaccccgccggagtcctgggacggcacggtcgccgcgcagaaa
ctgctgtccaccgtcttccggctgaagaaggagcggaaccagaagttcggcgccggccag
gccatcgacatcctgctgggcaagcgcaccgacaaggtcgtccagttccgccacgaccag
ctctcggtcttcggcatcggcaccgagctgcgcgacaccgagtggcgcggcgtggtccgc
cagttgctggccggcggttacctggccgtcgagggcgagtacagcaccctggttctcacc
gagcgcagcaccaccatcctgcgcggcgaggccaccgtcatgatgcgccgcgagatcccg
gcccagcgcctgcgcgccggctcccgcggttcgtcctcgtcctcgtcgtcccgggccgcc
gcggtggccccggccgacttccccgccgaggccgagcccctcttcgaacgcctgcgtgcc
tggcgcgccgccaccgccaaggagcagagcgtcccgccctacgtcatcttccacgacaag
accctgcgagccatcgccgtcctgtcccccaccaccctcgaccagctgggcaccgtcagc
ggcgtcggccagagcaaactgaccaagttcggcgacgacgtcctgtcggtgatccgcggc
gacgacccggccgaggccggcgcctcggccgccgacgccgcgagtgactcccccggctcg
ctctcctacgcccgcgacgacgaccagccggccgacgacctgttcccgccgcccgaggag
ccttacgactactacgacggcccggaggagtag
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