Actinoplanes oblitus: ACTOB_003006
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Entry
ACTOB_003006 CDS
T09687
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aou
Actinoplanes oblitus
Brite
KEGG Orthology (KO) [BR:
aou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aou03032
]
ACTOB_003006
03400 DNA repair and recombination proteins [BR:
aou03400
]
ACTOB_003006
Enzymes [BR:
aou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACTOB_003006
DNA replication proteins [BR:
aou03032
]
Prokaryotic type
DNA Topoisomerases
ACTOB_003006
DNA repair and recombination proteins [BR:
aou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACTOB_003006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WIM99356
LinkDB
All DBs
Position
3366032..3367006
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AA seq
324 aa
AA seq
DB search
MRRSVLKKPGLSRRRSGSGFRYLDPAGTPVRDRETLDRIKSLAIPPAWTDVWICPDPRGH
IQATGIDAAGRKQYRYHDAWRTARDEQKFDRVREVAGRLPKIRDRLCSDLTGRGLTRERV
LAAIVRLLDLGMFRVGGDASASRDEDPSYGLSTLRPEHVLRRGGEMMLKFRGKSGVEHER
VVDDGEVAEVLGALKRRRRGEDRLFAYWNSSVRAWQEIRADAVNEYLREISGAPMTAKDF
RTWHGTVTAAAELAEAGPQPTRTKRRKVVAQAMREVADKLGNTPAVARASYVDPRLLDKY
EKGEAPKRGDEREVRRLLDDSAAS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
ttgcggcgaagcgtactgaagaagcccggcctgagccggcggcggtccggtagcggtttc
cgctacctggaccccgccggcaccccggtccgcgatcgggagacgctggaccggatcaag
agcctggccatcccaccggcctggacggacgtctggatctgcccggacccgcgcgggcac
atccaggcgaccgggatcgacgcggccgggcgcaagcagtaccgctaccacgacgcctgg
cgcacggcccgcgacgagcagaaattcgatcgggtacgggaggtggccggccgcctcccg
aagatccgtgaccgactgtgctccgacctgaccggtcgcggcctgacccgggagcgggtc
ctcgccgccatcgtccggctgctcgacctgggcatgttccgggtcggcggggacgcctcg
gcgagccgcgacgaggacccgtcctacgggctctcgacgctgcgcccggagcatgtcctg
cgccgtggcggcgagatgatgctgaagttccgcggcaagtcgggcgtggagcacgagcgg
gtcgtcgacgacggcgaggtggccgaggtcctcggcgcgctcaagcgccgccggcgcggc
gaggaccggctgttcgcctactggaactcctcggtgcgggcctggcaggagatccgcgcc
gacgccgtcaacgagtacctgcgggagatcagcggcgccccgatgaccgcgaaggacttc
cgcacctggcacggcacggtgacggccgccgcggaactcgccgaggccggcccgcaaccc
accaggaccaagcggcgcaaggtcgtcgcgcaggccatgcgggaggtcgccgacaagctc
ggcaacaccccggcggtggcccgggcctcgtacgtcgacccgcggctgctggacaagtac
gagaagggcgaggcgccgaaacgcggcgacgagcgcgaggtgcgccgcctgctcgacgac
tcggccgcctcctga
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integrated database retrieval system
