Actinoplanes oblitus: ACTOB_003026
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Entry
ACTOB_003026 CDS
T09687
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aou
Actinoplanes oblitus
Pathway
aou00040
Pentose and glucuronate interconversions
aou01100
Metabolic pathways
aou02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aou00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ACTOB_003026
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACTOB_003026
Enzymes [BR:
aou01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ACTOB_003026
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
WIM99376
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Position
complement(3386766..3388307)
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AA seq
513 aa
AA seq
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MTRLRLAAAAGTAITAGAIALFLPNPQASAAVTGSATGFASVNGGTTGGAGGTTVRATTG
TQIHQALCSRASSSTPITIEVSGTINHGNTTKVSGASCNTAADKIELKDVSNVTIVGVGS
AVFDQLGIHLRNASNIIIQNVTVRNVKKSGSPTSNGGDAIGMETDVHNVWVDHATLIASG
GESAGYDGLFDMKDNTRYVTLSYSILRDSGRGGLVGSSDSDLANGPVTFHHNWYENIDSR
TPLLRGATAHIYNNYYHSLNESGINARAGGKARVDNNYFTDSRNPLGTFYTDLPGYWQVS
GNIFDNVTWEAAEDENPAGPNPVSNTSVSIPYSFALDGTSCVPSIVQQTAGANTGLRTSN
GACSATTSSPAATPSSSSPTPSPSVSTTPTQQPSGTNLSLAAGADGSSKGGGTSYGNVKD
GSLATYWSPSGTTGDISIKWGAATTVSRINIREVTGGVIGAYQVLNGSTGAVLTSGTGAG
VITFPATAVTKLTFRITAAAGTPKVAEFETYAS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaccagacttcgactggcggccgcggccggcaccgcgatcaccgccggcgcgatagcc
ctcttcctgccgaatccccaagcctccgcggcagtgaccggcagcgccaccggcttcgcc
agcgtcaacggcggcaccaccggcggcgccggcgggaccaccgtccgggcgaccaccggc
acccagatccatcaggccctgtgcagccgggccagcagcagcaccccgatcaccatcgag
gtgagcggcacgatcaaccacggcaacaccacgaaggtctccggcgccagctgcaacacc
gcggccgacaagatcgagctcaaggacgtcagcaacgtcacgatcgtcggcgtgggcagc
gccgtcttcgaccagctgggcatacacctcaggaacgccagcaacatcatcatccagaac
gtgacggtgcggaacgtcaagaagtccggctcgcccacctccaacggcggcgacgcgatc
ggcatggagaccgacgtgcacaacgtctgggtggaccacgccacgctgatcgcctcgggc
ggcgagtcggccggttacgacggcctgttcgacatgaaggacaacaccaggtacgtcacg
ttgtcctacagcatcctgcgcgactccggccgcggcgggctggtcggctccagcgacagc
gacctggccaacgggccggtcaccttccaccacaactggtacgagaacatcgactcgcgc
accccgctgctgcgtggcgccaccgcgcacatctacaacaactactaccacagcctcaac
gagtcggggatcaacgcgcgcgccggcggcaaggcccgggtcgacaacaactacttcacg
gactcgcggaacccgctcggcacgttctacaccgatctgcccggctactggcaggtctcc
ggcaacatcttcgacaacgtgacctgggaggccgcggaggacgagaacccggccggcccg
aacccggtgtcgaacaccagcgtcagcatcccgtactcgttcgccctggacggcacgtcc
tgcgtcccgtcgatcgtgcagcagaccgccggcgcgaacaccggcctgcgtacctccaac
ggcgcctgctcggccaccacgagcagcccggccgccacgccgagcagcagcagccccacg
ccgagcccgagcgtcagcaccaccccgacgcagcagcccagcggcaccaacctcagcctg
gccgccggcgccgacgggtccagcaagggcggcggcacgagctacggcaacgtcaaggac
ggcagcctggccacctactggtcgccgagcggcaccaccggtgacatctcgatcaagtgg
ggtgcggccaccaccgtctcccggatcaacatccgcgaggtcaccggcggcgtgatcggc
gcctaccaggtcctcaacggcagcaccggcgcggtcctcacgtcgggcaccggcgccggc
gtgatcaccttcccggccaccgcggtcaccaagctcaccttccggatcaccgccgccgcc
ggcacgccgaaggtggcggaattcgagacctacgcctcctga
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