Actinoplanes oblitus: ACTOB_005760
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Entry
ACTOB_005760 CDS
T09687
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
aou
Actinoplanes oblitus
Brite
KEGG Orthology (KO) [BR:
aou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aou03019
]
ACTOB_005760
Enzymes [BR:
aou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACTOB_005760
Messenger RNA biogenesis [BR:
aou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACTOB_005760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
MTR4-like_stalk
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
WIM93774
UniProt:
A0ABY8W7E1
LinkDB
All DBs
Position
complement(6383701..6386460)
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AA seq
919 aa
AA seq
DB search
MTSPAERYAASQRRAARAAEFPALDDFMLDVGFDLDDFQRAACEVVERGNGVLVCAPTGA
GKTVVGEFAVHLALRSGERKCFYTTPIKALSNQKFHDLVERYGPDKVGLLTGDNVINADA
PVVVMTTEVLRNMLYSGSAQLKNLAYVVMDEVHYLADRFRGAVWEEVIIHLPASVTLVSL
SATVSNYEEFADWLVTVRGKTEVVVSEHRPVPLWQHMLVGRRMFDLFHDADAARKHDVHP
ELLRYTREMERRLDLGERAGGWNQRGGRGRRWQPPPRAEVVDRLERAGLLPAILFIFSRA
GCDAAVQQCLGAGLRLTGPEERAEIRRIAQAKVAAIPAEDLSVLGYWEWLDGLERGIAAH
HAGMLPAFKEAVEECFVNGLVKAVFATETLALGINMPARCVVLERLVKFNGEAHVDLTPG
EYTQLTGRAGRRGIDVEGHAVVLWSPEVDPRHVAGLASTRTYPLRSSFRPSYNMAVNLVG
TVGAEKSRELLESSFAQFQADRSVVGLARQVQRNVDTMQSYGEDAACHHGDFDEYFAIRV
AIADREKSLARQGVAQRRSAANDSLAKLRIGDVIRVPQGRRAGLAVVLEPAAGGFGEPRP
LVLTQDRWAGRVSPADFGGEIEVLARVRVPKNFNHRSPGARRDLAAQVSGTGLDRHPDRR
RSGRSKASPGEDAEIALLKVQMRQHPCHACPEREDHARWAERRHRLLRDTDQLRAKVAGR
TGSLARTFDQVCAVLTARGYLSADGEVSEAGRMLGRIWSEADLLVAECVRQGVWDGLEPE
ELAAAVSMVLYESRREGEDRASVPKGPISGAVDACAKLWSEIAVEESEHGLSLTREPDPG
FVWPMFRWARGEPLAKVLASGHNYDADMPAGDFVRWARQVLDLLGQIREASAASPGVKET
ARKAITAVNRGVLAYQGGL
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgactagtcccgccgaacggtatgcggcatcccagcggcgggcggcgcgagccgccgag
ttcccggcgctcgacgacttcatgctcgacgtcggcttcgacctcgacgacttccagcgt
gccgcgtgtgaggtggtcgagcggggcaacggcgtgctggtgtgcgcgccgaccggggcc
ggcaagaccgtcgtcggtgagttcgccgtgcacctggcgctgcgctcgggcgagcgcaag
tgcttctacaccaccccgatcaaggcgctgtccaaccagaagttccacgacctggtcgag
cgctacggcccggacaaggtcggcctgctcaccggtgacaacgtgatcaacgcggacgcc
ccggtggtggtgatgaccaccgaggtcctgcgcaacatgctctactccgggtcggcccag
ctgaaaaacctggcgtacgtggtgatggacgaggtgcactacctcgccgaccggttccgc
ggcgcggtctgggaagaggtgatcatccacctcccggcctcggtcaccctggtctcgctc
tccgccacggtcagcaactacgaggagttcgccgactggctggtcaccgtccggggcaag
accgaggtggtggtcagcgagcaccggccggtcccgctctggcagcacatgctggtcggc
cgccggatgttcgacctgttccacgacgccgacgcggcccgcaaacacgacgtgcacccc
gagctgctgcgctacacccgcgagatggagcgccgcctggacctgggcgagcgcgccggc
gggtggaaccagcgcggcggccgcggccgccgctggcagccgccgccgcgcgccgaggtg
gtcgaccggctggagcgcgccgggctgctaccggccatcctgttcatcttcagccgggcc
ggttgcgacgccgccgtgcagcagtgcctcggcgccggcctgcgcctgaccggcccggag
gagcgcgccgagatccgccggatcgcccaggccaaggtcgctgccatcccggccgaggac
ctgtccgtgctgggttactgggagtggctcgacggcctggaacggggcatcgccgcgcac
cacgccggcatgctgcccgccttcaaggaggcggtcgaggagtgcttcgtcaacgggctg
gtcaaagcggtcttcgccaccgagaccctggccctgggcatcaacatgccggcccgctgt
gtcgtcctcgaacgcctggtcaagttcaacggcgaggcgcacgtcgacctgaccccgggg
gagtacacgcagctcaccggccgggccgggcgccgcggcatcgacgtcgaggggcacgcc
gtggtgctctggagccccgaggtggacccgcggcacgtggccggtctcgcctccacccgc
acgtatccgctgcgctcgtcgttccgcccgtcctacaacatggcggtcaacctggtcggc
accgtcggcgcggagaaatcccgcgagctgctggagtcgtcgttcgcccagttccaggcg
gaccgctcggtggtcgggctggcccgccaggtgcagcgcaacgtcgacaccatgcagtcg
tacggggaggacgccgcctgccaccacggcgacttcgacgagtacttcgccatccgggtg
gccatcgccgaccgggagaaatcactggcccgccagggtgtcgcccagcgccgctcggcc
gccaacgactccctggcgaaactgcgcatcggcgacgtgatccgggtgccgcagggccgc
cgcgccggcctggccgtggtgctggagccggcggccggcgggttcggcgagccgcgcccg
ctggtgctcacccaggaccgctgggccggccgggtcagcccggccgacttcggcggcgag
atcgaggtgctggcccgcgtgcgggtgccgaaaaacttcaaccaccgttccccgggtgcc
cgccgcgatctggccgcccaggtcagcgggaccgggctggaccggcacccggatcggcgc
cgatccgggcgcagcaaggcgagccccggcgaggacgccgagatcgccctgctcaaggtg
cagatgcgccagcacccgtgccacgcctgcccggagcgggaggaccacgcccgctgggcc
gagcgccggcaccggctgctgcgcgacaccgaccagctgcgggccaaggtggccgggcgg
accgggtcgctggcgcgtacgttcgaccaggtctgcgcggtgctgaccgcgcgcggctac
ctgtcggccgacggtgaggtgagcgaggccggccggatgctcgggcggatctggtcggag
gccgacctgctggtcgccgagtgcgtgcggcagggcgtctgggacggtctggagcccgag
gagctggccgccgcggtctccatggtgctctacgagtcgcgccgtgagggtgaggaccgt
gcctcggtgccgaagggcccgatcagcggcgccgtcgacgcctgcgccaagctgtggtcc
gagatcgccgtggaggagagcgagcacgggctgtcgctgacccgcgagcccgacccgggc
ttcgtctggccgatgttccgctgggcccgcggtgagccgctggccaaggtgctggccagc
gggcacaactacgacgcggacatgccggccggtgacttcgtccgctgggcgcggcaggtg
ctcgacctgctcggccagatccgggaggcgtcggccgcctcacccggcgtcaaggagacc
gcccgcaaggcgatcaccgctgtcaaccgcggcgtcctggcgtaccagggtggcttgtga
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