Actinoplanes oblitus: ACTOB_006055
Help
Entry
ACTOB_006055 CDS
T09687
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aou
Actinoplanes oblitus
Pathway
aou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACTOB_006055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aou03400
]
ACTOB_006055
Enzymes [BR:
aou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACTOB_006055
DNA repair and recombination proteins [BR:
aou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACTOB_006055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
HTH_IclR
UvrD_C
NPHP3_N
AAA_16
nSTAND3
AAA
SH3_18
PIF1
NACHT
UvrD-helicase
P-loop_TraG
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WIM94055
LinkDB
All DBs
Position
6711390..6713582
Genome browser
AA seq
730 aa
AA seq
DB search
MSGAAQTSRPAPHVLEAVLERLTYVNEETGYTVARVATAKSGPDLLTVVGALLGAQPGES
LRLSGWWTSHPQYGRQFEVVSYTTVLPATVQGIRRYLGSGLVKGIGPVFAERIVDHFGVD
TLRIIEESPDRLIEVTGLGPKRTAKITAAWAEQKAIKEVMLFLQGVGVSTSIAVRIYKKY
GDASISVVRNSPYKLASDVWGIGFKTADTIAQAVGIPHDSPERVKAGLQYTLSQATDNGH
CFLPVPQLTDEAAKILEVPPGLVPACLAELVDEEGVVREGDNVYLVPFHRAEMSLASSLV
ALLRDKSDRMPAFHGVDWAKALAWLHQRTGSTLAPEQEAAVKLALTEKVAVLTGGPGCGK
SFTVRSVVELAAAKKAKIQLVAPTGRAAKRLAELTGHPAATVHRLLKLQPGGDASYDRDN
PLDADLLVVDESSMLDLILANKLVKAIPPGAHLLLVGDVDQLPSVGAGEVLRDLLAADVI
PRVRLTQIFRQAAESGVVTNAHRINHGRPPLLDGMTDFFLFPCDDTEATAALTVDVACRR
IPRRFGLDPRRDVQILTPMHRGPAGAGALNTLLQQELTPGREGLPERRVGGRVFRVGDKV
TQIRNNYDKGVAGVFNGTVGVVTALSPEEQTLQVRTDEDELIDYDFDELDELAHAYAITI
HRSQGSEYPAVVIPLTTSAWMMLQRNLLYTAITRAKKLVVLVGSRRALAAAVRTVGAGRR
YTALTERLSR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgcggcgcagacctcccgcccggcgccgcacgtcctggaagcggtgctggag
cggctgacctatgtgaacgaggagaccggttacacggtcgcccgggtggccaccgcgaag
agcggtccggacctgctgaccgtggtcggcgcgctgctgggcgcgcagcccggggagagc
ctgcggctgtccggctggtggacctcgcatccgcagtacggccggcagttcgaggtggtc
tcctacaccacagtgctgccggcgaccgtgcagggtatccgccgctacctgggatccggg
ctggtcaagggcatcggcccggtcttcgccgagcggatcgtcgaccatttcggcgtggac
accctgcggatcatcgaggagtcgccggaccggctgatcgaggtgaccgggctcggcccg
aaacgcaccgcgaagatcaccgcggcgtgggccgagcagaaggcgatcaaggaggtgatg
ctgttcctgcagggggtcggcgtctccacgtcgatagcggtgcggatctacaagaagtac
ggcgacgcctccatctcggtggtgcggaacagcccctacaagctcgcctcggacgtctgg
ggcatcgggttcaagaccgccgacaccatcgcgcaggcggtcggcatcccgcacgacagc
cccgaacgggtgaaggcgggcctgcagtacaccctgtcgcaggcgaccgacaacggtcac
tgcttcctgccggtcccgcagctgaccgacgaggccgcgaagatcctcgaggtgccgccc
ggactcgtcccggcatgtctggcggagctggtcgacgaggagggcgtcgtccgcgagggc
gacaacgtctacctcgtgccgttccaccgcgcggagatgtcgctcgcctcgtcgcttgtc
gccctgttgcgcgacaagtcggaccggatgccggccttccacggcgtggactgggcgaaa
gccctggcctggctgcaccagcgcaccggctccaccctcgcccccgagcaggaggccgcg
gtcaagctcgcgctcaccgagaaggtggcggtgctcaccggcggccccggctgcggcaag
agcttcaccgtccggtccgtcgtcgagctggccgccgccaagaaggccaagatccagctg
gtcgcgccgaccggccgcgccgcgaaacgcctcgccgagctcaccgggcaccccgccgcc
accgtgcaccgcctgctcaagctccagcccggcggggacgccagctacgaccgcgacaac
ccgctcgacgccgacctgctggtcgtcgacgagtcctcgatgctcgacctgatcctggcg
aacaagctggtcaaggcgatcccgccgggcgcgcacctgctgctggtcggcgacgtcgac
cagctgcccagcgtgggcgccggcgaggtgctgcgcgacctgctcgccgccgacgtcatc
ccccgggtccggctcacccagatcttccggcaggcggcggagagcggcgtggtcaccaac
gcgcaccggatcaaccacggccggccgccgctgctcgacgggatgaccgacttcttcctg
ttcccgtgcgacgacaccgaggcgaccgcggcgctcaccgttgacgtcgcgtgccgccgg
atcccccgcaggttcggtctcgacccgcgccgggacgtgcagatcctcaccccgatgcac
cgcggcccggccggcgccggcgcgctgaacacgctgctgcagcaggaactcacaccgggc
cgggaggggttgccggaacgccgggtcggcggccgggtgttccgggtcggcgacaaggtc
acccagatccggaacaactacgacaagggcgtggccggcgtcttcaacggcaccgtcggc
gtggtcaccgcgctgtccccggaggaacagacgctccaggtgcgcaccgacgaggacgag
ctgatcgactacgacttcgacgagctggacgagctggctcacgcgtacgcgatcaccatt
caccgctcgcagggctcggagtacccggcggtggtgatcccgctgaccaccagcgcctgg
atgatgctgcagcgcaacctgctctacaccgcgatcacccgggccaagaagctggtggtg
ctggtcgggtcgcgcagggcgctggccgccgcggtgcggacggtcggcgcggggcggcgg
tacaccgcgctgaccgagcgcctcagccgctag
DBGET
integrated database retrieval system
