Actinoplanes oblitus: ACTOB_006951
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Entry
ACTOB_006951 CDS
T09687
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
aou
Actinoplanes oblitus
Pathway
aou02020
Two-component system
aou02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aou00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACTOB_006951
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACTOB_006951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aou03021
]
ACTOB_006951
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
aou02035
]
ACTOB_006951
Transcription machinery [BR:
aou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACTOB_006951
Bacterial motility proteins [BR:
aou02035
]
Flagellar system
Flagellar assembly proteins
Stator
ACTOB_006951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Tnp_ISL3
HTH_23
NirdL-like_HTH
Phage_terminase
KORA
Motif
Other DBs
NCBI-ProteinID:
WIM94893
LinkDB
All DBs
Position
complement(7812655..7813506)
Genome browser
AA seq
283 aa
AA seq
DB search
MNGEAPAVDRRGEDIVRANMPLVGHLVREMLARVPAHVNRDDLLSAGYAALVAAARGFDA
ERGVPFPRFAAARVRGALLDELRGLDWASRSVRQRARRTDAAREELTAELGRTPSVPELA
ERLGCTVEDIEHAADDVHRATVFSLQGFATATADDLVTERTPGPEDMLILRERLGYLRHA
VDALPDRLRVVVQGYFFEERPMADIAADLGVSESRVSQLRAEALVLLRDGLNTHLDPALA
AENPPKEGCVARRRAAYYDRIASRGTLRTRLALTGPDGIPVAA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtgaggcacctgccgtcgatcggcgtggcgaggacatcgtgcgagcgaacatg
ccgctcgtcgggcacctggtgcgtgagatgctggcccgggtccccgcccacgtcaaccgc
gatgacctgctctccgccgggtacgccgcgctggtcgccgccgcccgcggtttcgacgcc
gagcggggcgtgcccttcccccggttcgccgccgcccgggtgcgcggcgccctgctggac
gagctgcgcgggctggactgggcgagccgctcggtccgccagcgggcccgccggaccgac
gcggcccgcgaggagctgaccgccgagctcggccgcaccccgagcgtgccggagctggcc
gagcggctgggctgcacggtcgaggacatcgagcacgccgccgacgacgtgcaccgcgcc
acggtgttcagcctgcagggcttcgccaccgcgacggccgacgacctggtgaccgaacgc
acgcccgggccggaggacatgctgatcctccgggagcgtctcggctatctgcggcacgcg
gtggacgcgctgccggaccggctgcgcgtggtcgtccagggctacttcttcgaggagcgc
ccgatggccgacatcgccgcggacctgggggtcagcgagtcccgggtgtcgcagctgcgc
gccgaggcgctggtgctgctgcgggacgggctgaacacccacctggacccggcgctcgcc
gcggagaacccgcccaaggagggctgcgtggcgcggcgccgggcggcgtactacgaccgg
atcgccagccgcggcacgctgcgcacccggctcgccctgaccggcccggacgggatcccg
gtcgcggcctag
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