Actinoplanes oblitus: ACTOB_007963
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Entry
ACTOB_007963 CDS
T09687
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aou
Actinoplanes oblitus
Pathway
aou03420
Nucleotide excision repair
aou03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACTOB_007963
03430 Mismatch repair
ACTOB_007963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aou03400
]
ACTOB_007963
Enzymes [BR:
aou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACTOB_007963
DNA repair and recombination proteins [BR:
aou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACTOB_007963
MMR (mismatch excision repair)
Other MMR factors
ACTOB_007963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
WIM95826
LinkDB
All DBs
Position
complement(8943156..8946710)
Genome browser
AA seq
1184 aa
AA seq
DB search
MRADAGPRFTPVELARLLRLPPPTDEQAAIIAHPVKPLLVVAGAGSGKTETMASRVVWLV
ANGYAHPGEILGLTFTRKAAGELAHRVRTRLGQLIRRLGRDDALAGEATIATYHSYAARV
VTEHGLRGGFEPSARLLTEAARWQIVDSLVRSYTGEMTGLNRAPGTVTDDVLALSAELAE
HLRSPDDLAAWTGRFFAEVQSFPGRMYSDVAEMLRRQQHRLTLLPLVRLYEQRKLDLEAM
DFGDQMARAALVARDHPEVGRIERGRFRMVLLDEYQDTSHAQVTMLNNLFGGGHPVTAVG
DPCQSIYGWRGASAGTLDRFPDEFPDAEGHPAWVRSLTRSWRNRPEILEVANVISAPLRA
RVGTLRPADRVAEAVGGRTVSCALLRSYAEEASWIADSILTAWRLVAGMPKALPEEIPLE
RRPTSAVLVRVRSQIPVIEEALRSRGLPVEVVGLGGLLDTPEVRDVVCTLRVLADPTDGA
SLLRLLTGARWRIGPRDLVALHRRARALAADRAAEQARTADSPDEVMADRLDDATLIEAM
ADLGSPHQFSVAGFARLAAYSRELSALRQRLDQPLPDLLADIERTIGLDVEVAVRGWVAG
DAGLARGHLDALGAAATRYTSENETSTLAGFLAFLTAAEEEERGLEPGQVDVAEGAVQIL
TAHAAKGLEWDVVSVAGLCRGVWPGLVRGSDHYLGGIGVLPFPLRGDAAGLPELNLGDAV
EQKDVNRALGEFARAWREHDEREERRLAYVAMTRPRRLLLCSGYWWGDGVKRPRGPSVFL
DEVRATCEAGAGVVTTWAPEPAPGETNPSEELVATAEWPADPLGVRRPPMAAAADLIRRM
IANPDASAAEAFADLATAHPEVAARAGLAADLAGLAAPGSRPAASSPDRPIPVRPEPSAP
TDAPPAPADAEPPAPAEPVPAQDAAPEPAAPAGFDRDTLLAAATAADRVTAAVDPDIARW
RREAQLLLAERAERTRHDGPIEVALPPHLSVSQLVVLRRDPQALARSLRRPLPQRPAPHA
RRGTAFHVWLEQRFGAARLIDIDELPGAADDQAAGDEELAELQEAFLTGEWAGRTPIDVE
VPFATTVAGVVIRGRMDAVFADPGGRFDVIDWKTGRRPTGAAAEAAAVQLSAYRIAWASL
AGVPVTRVRAGFHYVREQVTVRPTDLMDVASLTALITEIPEEAL
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagacgccggcccccgcttcaccccggtcgagctggcccgcctgctgcgcctg
ccgccgcccaccgacgagcaggccgcgatcatcgcccacccggtgaaaccgctgctcgtg
gtcgccggcgccggttccggcaagaccgagaccatggcgtcccgggtggtctggctggtg
gcgaacgggtacgcccaccccggcgagatcctcggcctgaccttcacccgcaaggcggcc
ggcgagctggcccaccgggtccgcacccggctcggccagctgatccgccgcctgggccgg
gacgacgcgctggccggtgaggccaccatcgccacctaccactcctacgcggcccgggtg
gtcaccgagcacggcctgcgcggcgggttcgagccgtccgcccggctgctcaccgaggcg
gcccgctggcagatcgtggactccctggtccggtcgtacaccggggagatgaccgggctg
aaccgcgcgcccggcacggtcaccgacgacgtcctcgcgctctccgccgagctggccgag
cacctgaggtccccggacgacctggccgcctggaccggccggttcttcgccgaggtgcag
tccttcccggggcggatgtactcggacgtcgccgagatgctccgccgccagcagcaccgg
ctcaccctgctgcccctggtccgcctctacgagcagcgcaaactcgacctggaggcgatg
gacttcggtgaccagatggcacgcgccgcgctggtcgcccgggaccaccccgaggtcggc
cggatcgagcgtggccggttccggatggtcctgctggacgagtaccaggacaccagccac
gcccaggtgacgatgctgaacaacctgttcggtggcgggcacccggtgaccgcggtgggt
gacccgtgccagtcgatctacggctggcggggcgcgtcggccggcaccctggaccggttc
cccgacgagttcccggacgccgagggccacccggcctgggtgcggagcctgacccgcagc
tggcgcaatcgcccggagatcctcgaggtggcgaacgtgatctccgccccgctgcgggcc
cgggtggggacgctgcgacccgcggatcgggtcgccgaggcggtgggcgggcggacggtc
agttgtgcgctgctcaggtcgtacgccgaagaggcctcgtggatcgcggactcgatcctc
accgcctggcgcctggtcgccggcatgccgaaggcactgcccgaggagatccccctggag
cggcgcccgaccagcgcggtcctggtccgggtgcgcagccagatcccggtgatcgaggag
gcgctgcgctcccgcggcctgccggtcgaggtggtcgggctgggcggcctgctcgacacc
cccgaggtccgggacgtggtgtgcacgctgcgggtgctcgccgacccgaccgacggcgcc
tccctgttgcggctgctcaccggcgcccgctggcggatcggcccgcgcgacctggtcgcg
ttgcaccgccgggcccgcgcgctggccgccgaccgtgccgccgagcaggcccggaccgcc
gactcgccggacgaggtgatggccgaccggctcgacgacgccaccctgatcgaggcgatg
gccgatctgggcagcccgcaccagttctcggtggcgggattcgcccggctcgccgcctac
agccgggagctgagcgccctgcggcagcgcctcgaccagccacttcccgacctgctggcg
gacatcgagcggaccatcgggctggacgtcgaggtcgcggtccgcggctgggtggccggt
gacgccggcctggcccgcggtcacctggacgcgctcggcgcggccgccacccgttacacc
agcgagaacgagaccagcactctcgccggtttcctggcgttcctgaccgccgccgaggag
gaggagcgcgggctggaaccgggccaggtcgacgtggccgagggcgccgtgcagatcctc
accgcgcacgccgcgaagggcctggagtgggacgtggtctcggtggccggcctgtgccgt
ggcgtctggccgggcctggtccgcgggtccgaccactatctcggcggcatcggcgtgctg
ccgttcccgctgcgtggcgacgcggccgggctgcccgagctgaatctcggcgacgctgtc
gagcagaaggacgtgaaccgcgcgctcggcgagttcgcccgtgcctggcgcgagcacgac
gagcgcgaggagcgccgcctggcctacgtcgcgatgacccgcccgcgccgcctgctgctc
tgctccggctactggtggggcgacggcgtgaaacgtccgcgcggcccgtcggtcttcctc
gacgaggtccgcgccacctgtgaggcgggcgccggcgtggtgacgacctgggcgcccgag
ccggcccccggcgagaccaacccgagcgaggaactggtcgccaccgccgagtggccggcc
gacccgctcggcgtgcgccgcccgccgatggccgcggccgccgacctgatccgccgcatg
atcgccaacccggacgcctcggcggccgaggccttcgccgacctcgcgacggcccatccc
gaggtcgcggcccgcgccggcctggcggccgacctggcgggcctcgccgcccccggttcc
cgcccggccgcctcttccccggatcgcccgattccggtacgcccggagccctcggcgccc
acggatgctccgccagcccccgccgacgccgaacccccggctcctgccgagcccgtcccc
gcccaggacgccgcccccgagcccgccgcccccgccgggttcgaccgggacaccctgctg
gccgccgcgaccgccgcggaccgggtcaccgccgccgtcgacccggacatcgcccgctgg
cgccgcgaggcccagctcctgctggccgagcgcgccgaacgcacccgccacgacggcccg
atcgaggtcgccctgcccccgcacctctcggtctcccagctggtggtcctgcggcgcgat
ccgcaggccctggcccgctcactgcgccgcccgcttccgcagcgcccggcaccgcacgcc
cgccgcggcaccgccttccatgtctggctggagcagcggttcggcgcggcccgcctgatc
gacatcgacgaactgcctggcgccgccgacgaccaggcggccggcgacgaggaactggcc
gagctgcaggaggcgttcctcaccggcgagtgggccggccggaccccgatcgacgtcgag
gtaccgttcgccaccacggtcgccggtgtggtgatccgcggccggatggacgcggtcttc
gccgaccccggtggccgcttcgatgtgatcgactggaagaccggccgccgccccaccggc
gccgccgccgaggccgccgccgttcagctctccgcgtaccggatcgcctgggccagcctg
gccggcgtcccggtcacccgggtccgggccggtttccactatgtccgtgagcaggtcacc
gtccgccccaccgacctgatggacgtggcgtcgctgaccgccctgatcaccgagatcccc
gaggaagccctctga
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