Actinoplanes oblitus: ACTOB_008026
Help
Entry
ACTOB_008026 CDS
T09687
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
aou
Actinoplanes oblitus
Pathway
aou03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACTOB_008026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aou03000
]
ACTOB_008026
03400 DNA repair and recombination proteins [BR:
aou03400
]
ACTOB_008026
Enzymes [BR:
aou01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ACTOB_008026
Transcription factors [BR:
aou03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ACTOB_008026
DNA repair and recombination proteins [BR:
aou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACTOB_008026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
DUF6233
DUF7437
Motif
Other DBs
NCBI-ProteinID:
WIM95886
LinkDB
All DBs
Position
9009487..9010986
Genome browser
AA seq
499 aa
AA seq
DB search
MELDFERCYRAVDSRDQRFDGCFYTAVRTTGIYCRPSCPAVTPKRQNVTFYLSAAAAQRG
GFRACRRCRPDAAPGSPEWDARADTVGRAMRLIGDGVVDREGVAGLASRLGYTERHLNRM
LTTELGAGPLALARAQRAQTARILVETTDLGLAEIAFAAGFGSVRQFNDTMLEVYAQAPG
RLRETRRAVRGEAGTINLRLAYRAPLHVESLLGFLGARTLPGVDELDGDTYRRGLVLPHG
GATVALRPAERWVFATLRLSDVRDLAPAVARCRRLLDLDADPDAIDGTLGGDPALAAGVA
AEPGVRVPRAVDGFEMAVRAVVGQQVSVSGARTTLGRIVRAAGVAGAFGDRGVSGGSADL
GPSGPAPAPATTSELTGFPPADVVATLPDSAFGMPTARRDTIRALATAVADGKLDLDPGA
DRAETTARLLELPGIGPWTAGYVAMRATGDPDVFLPTDLAARRGAAALGLPDTARALAAH
AERWRPWCSYALVRLWRAA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggagctggacttcgagcgttgctaccgcgctgtcgacagccgcgaccagcggttcgac
gggtgcttctacaccgcggtgcgaaccaccggcatctactgccggccgtcctgcccggcg
gtcacgccgaaacggcagaacgtcacgttctacctgagcgcggcggccgcccagcggggc
ggcttccgggcctgccgccggtgccggccggacgcggcgcccggctcccccgaatgggac
gcgcgggccgacacggtcggccgggccatgcggctgatcggcgacggcgtggtcgaccgg
gaaggcgtggccgggctggcgtcccgcctcggctacaccgaacggcacctcaaccggatg
ctgaccacggaactcggcgccgggccgctcgccctggcccgggcgcagcgggcgcagacc
gcccggatcctggtggagacgaccgacctcggactcgcggagatcgcgttcgcggccggg
ttcggcagcgtgcggcagttcaacgacacgatgctcgaggtgtacgcgcaggcgccgggc
cggctgcgggagacccggcgggcggtccggggcgaggcggggacgatcaatctccggctg
gcgtaccgggcgccgctgcacgtcgagtcgctgctcgggttcctcggggcgcggaccctg
cccggggtggacgagctggacggggacacgtaccggcgggggctggtgctgccgcacggc
ggcgcgaccgtcgcgctgcggccggccgagcggtgggtgttcgcgacgttgcggctcagc
gacgtccgggacctcgcgccggcggtggcacggtgccggcggctgctggacctggacgcg
gacccggatgcgatcgacggcacgctcggcggggatccggcgctcgcggcgggtgtggcg
gcggagccgggggtgcgggtgcccagggcggtggacgggttcgagatggcggtgcgggcg
gtggtggggcagcaggtgagtgtttcgggggctcggaccacgttggggcggatcgtgcgg
gctgccggggtggccggggcgttcggtgatcgcggtgtgtcgggtgggtctgcggatctc
ggcccttcgggccccgcccccgcccccgccaccacctccgaactcaccggcttcccgccc
gccgacgtcgtagccaccctcccggattccgccttcggcatgcccaccgcccgccgagac
accatccgggccctcgccaccgccgtggccgacggcaaactcgacctcgaccccggcgcc
gaccgagccgaaaccaccgcccgcctcctggagctccccggcatcggcccgtggaccgcc
ggttacgtcgcgatgcgcgccaccggcgaccccgacgtcttcctccccaccgacctggcc
gcccgccgcggcgcggccgccctcggcctcccggacacggcgagggcgctcgccgcgcat
gccgaacgctggcgcccgtggtgctcgtatgccctggtccggctgtggcgagccgcctga
DBGET
integrated database retrieval system