Azospirillum oryzae: HUE56_04685
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Entry
HUE56_04685 CDS
T06782
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
aoz
Azospirillum oryzae
Brite
KEGG Orthology (KO) [BR:
aoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoz03021
]
HUE56_04685 (rpoH)
Transcription machinery [BR:
aoz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUE56_04685 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
UCR_14kD
Sigma70_r1_2
Sigma70_r3
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QKS49832
UniProt:
A0A6N1ANW3
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All DBs
Position
unnamed3:161389..162270
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AA seq
293 aa
AA seq
DB search
MSTAIALRSPDSGESLSRYINDTHRYPVLPAEDEYMLAKAWTEHGDVDAAHKLVTSHLRL
VVKIAGGYRGYGLPLSDLIAEGNLGLMTAVKKFEPERGFRLSTYAMWWIKASIQDYILRS
WSLVKIGTTAAQKKLFFSLGRLKRKLGEYGSGDLQPDSVTSIATDLSVPEEDVVAMNRRL
SAPVASLNAPMSADGDSGEWQDLLADERPSVEESLVERGEARQRSALLREAMGVLNDRER
DILTSRRLSDSPLTLEDLSVRYGVSRERIRQIEEKAFEKVARQTRVLAAAVAA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgccattgccctccgttcgcccgattccggcgaatcgctgtcccgctacatc
aacgacacgcatcgctacccggtcctgccggccgaggacgaatacatgctggccaaggcc
tggaccgagcatggcgacgtcgatgcggcgcacaagctggtcaccagccatctccgtctc
gtcgtcaagatcgccggcggctatcgcggctacggcctgccgctgtccgacctgatcgcc
gagggcaatctcggcctgatgaccgccgtcaagaaattcgaaccggaacgcggcttccgc
ctgtccacctacgcgatgtggtggatcaaggcctcgatccaggattacatcctgcggtcc
tggagcctcgtgaagatcggcaccaccgccgcgcagaagaagctgttcttcagcctgggc
cgcctgaagcggaagctgggcgagtacggcagcggcgacctgcagcccgacagcgtcacc
agcatcgccaccgacctgtcggtgccggaagaggatgtggtcgccatgaaccgccgcctg
tcggcgccggtggcctcgctgaacgcgccgatgagtgcggacggcgattccggtgaatgg
caggatctgctggccgacgagcgtccgtcggtggaggagtcgcttgtcgaacgtggcgag
gcccggcagcgcagcgccctgctgcgcgaggcgatgggcgtgctgaacgaccgcgagcgc
gacatcctgaccagccgccgcctgtccgacagcccgctgaccctggaagatctgtcggtc
cgctacggcgtcagccgcgagcgcatccgccagatcgaggaaaaggccttcgagaaggtt
gcccgccagacccgcgtcctggccgccgccgtcgcggcctga
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