KEGG   Azospirillum oryzae: HUE56_06490
Entry
HUE56_06490       CDS       T06782                                 
Name
(GenBank) ATP-dependent RecD-like DNA helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
aoz  Azospirillum oryzae
Pathway
aoz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aoz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HUE56_06490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aoz03400]
    HUE56_06490
Enzymes [BR:aoz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     HUE56_06490
DNA repair and recombination proteins [BR:aoz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HUE56_06490
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 OB_YrrC SH3_13 UvrD_C_2 HHH_5 AAA_11 Viral_helicase1 Helicase_RecD PIF1 HHH_2 UvrD-helicase nSTAND3 AAA_16 NTPase_1 RsgA_GTPase AAA_22 AAA_28 AAA_29 NACHT T2SSE AAA AAA_24 cobW DEAD NPHP3_N ABC_tran ATPase_2 AAA_17 MeaB NB-ARC TrwB_AAD_bind CbiA TraI_hel_assoc_N SRP54 TsaE MobB Pox_A32 SLFN-g3_helicase AAA_14 Mg_chelatase ATP_bind_1 AAA_5 MMR_HSR1
Other DBs
NCBI-ProteinID: QKS50161
UniProt: A0A6N1AEK7
LinkDB
Position
unnamed3:559147..561330
AA seq 727 aa
MSGQAIASSTESLAGLVERVTFHSAETGFCVLRVKVRGHRDLVVVVGHAAMISAGEWIQA
SGSWVNDRTHGLQFKATFLKATQPTTLEGIEKYLGSGMIKGIGPVYAKKLVKAFGEAVFD
VIEAEPGRLQEVTGIGPRRADRIVKGWADQRAIREIMLFLHANGVGTSRAVRIYKTYGQE
AIQLITENPYRLARDIRGIGFKTADAIAAKLGIEKTAMVRVRAGIGYALAEAMDEGHCGL
PVEDLEKLASELLEVATDLVAEALTDELRDGAVIADQLEGRDCVFLAGLYRAEQAIAARL
RGLAAGTLPWPAIDMQKALEWVEGKTGLTLAPSQREAVRLALASKVMVITGGPGVGKTTL
VNSILKILAAKHIRILLCAPTGRAAKRLSESTGLEARTIHRMLAFDPAAGSFKHSEENRL
ECDLLVVDETSMVDVPLMNALLKATPDRSALVLVGDVDQLPSVGPGQVLADVIASGAVPV
VRLTEVFRQAAASRIIVNAHRINQGQMPDLTPIEGSDFYFVEAAEPENGVRKVIEVVRNR
IPKRFGLDPVRDVQVLCPMNRGGLGARSLNVELQAVLNPPGDVRVERFGWTYCVGDKVMQ
TENDYEKEVYNGDLGVITAMDPENSELLIDFDGREVPYDFGELDRVSLAYATTIHKSQGS
EYPAVVIPLAMQHWSMLRRNLVYTGVTRGKRLVVIVGQRKALGMAVRARQEGRRWSKLKE
WLLAKSA
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgagcgggcaagccatcgcgtcatcgacggagtccctggcagggctggtggagcgcgtg
acctttcacagcgccgagaccggcttttgcgtgctccgggtgaaggtccgcggacatcgg
gacttggttgtcgtcgtcggccatgcggcgatgatctcggccggggaatggatccaggcg
agcggcagctgggtcaacgatcgcacccacggcctccaattcaaggccaccttcctgaag
gcaacccagccgaccacgctggagggcatcgagaagtacctgggatctgggatgatcaag
ggcatcggcccggtctacgcgaagaagctggtgaaggcattcggcgaggccgtgttcgac
gtcatcgaggccgagcccggtcgcctgcaagaggtcacgggcatcgggcccaggcgggcc
gaccgcatcgtcaaaggatgggccgaccagcgggcgatcagggagatcatgctgttcctg
cacgccaacggcgtcgggacctccagggcggtccgcatctacaagacctacgggcaggag
gcgatccaactcatcaccgagaacccataccggctggccagggacatccgtggcatcggc
ttcaagaccgctgatgccatcgcggccaagctgggcatcgagaagacggccatggtccgc
gtccgggcaggcatcggctatgcgctggccgaggctatggacgaggggcactgcggcctg
ccggtggaggacctggagaagctggccagcgaactcctggaggtcgccaccgatctggtg
gccgaggcgctgacggacgagcttcgtgacggggccgtcatcgccgatcagttggagggc
agggactgcgtcttcctggccggactgtaccgggccgagcaggccatcgccgcccggtta
cggggacttgcggccgggacgctgccctggcccgccatcgacatgcagaaggcgctggag
tgggtggagggaaagacgggactgacgctggcgccgagccagcgggaggctgtccggctt
gctctggcctccaaggtcatggtcatcaccggcggcccgggcgttggcaagacgaccctg
gtgaattccatcctgaaaattctggccgccaagcacatccgcatcctgctgtgcgccccg
accggccgggcggccaagcggctctcggagagcaccgggctggaggccaggaccatccac
cggatgctcgccttcgacccggctgccggaagcttcaagcacagcgaggagaaccggttg
gaatgcgatctgctcgtcgtcgacgagacgtccatggtggacgtgccgctgatgaacgcg
ctgctgaaggcgacccccgacaggtcggccctcgtcttggtcggcgatgtcgaccagttg
ccgtcggtggggccggggcaggtgctcgccgacgtgatcgcttccggcgccgtgcccgtg
gtgcgcctgaccgaggtcttccgacaggcggcggctagccgcatcatcgtcaatgcccac
cgcatcaatcagggccagatgccggatctgacacccatagagggctcggacttctacttc
gtcgaggcggcagaacccgagaacggtgttcgcaaggtcatcgaagtcgttcggaacagg
atcccgaagcgcttcggcctcgaccccgtgcgcgatgtccaggtgctctgtccgatgaac
cgcgggggcctcggcgcccggtcgttgaacgtggaactccaggcggtcctgaacccgccg
ggcgatgtccgggtggagcgcttcggctggacctactgcgttggcgacaaggtgatgcaa
accgagaacgactacgagaaggaggtctacaacggcgacctgggcgtcatcaccgccatg
gatccggagaacagcgaactgctgatcgacttcgacggccgggaggttccctacgacttc
ggcgagctcgaccgggtatcactggcctacgcgacgacgatccacaagagccagggctcg
gaatacccggccgtcgtcatcccgctggcgatgcagcactggagcatgctcaggcgcaat
ctcgtctacaccggcgtcacccgcgggaagcgactggtagtcatcgtggggcagcggaag
gcgctcgggatggcggttcgggcacggcaggaagggcgccggtggtcgaagctgaaggaa
tggcttctagcaaagtcggcctga

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