Azospirillum oryzae: HUE56_06960
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Entry
HUE56_06960 CDS
T06782
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aoz
Azospirillum oryzae
Pathway
aoz03030
DNA replication
aoz03430
Mismatch repair
aoz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUE56_06960 (dnaE)
03430 Mismatch repair
HUE56_06960 (dnaE)
03440 Homologous recombination
HUE56_06960 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoz03032
]
HUE56_06960 (dnaE)
03400 DNA repair and recombination proteins [BR:
aoz03400
]
HUE56_06960 (dnaE)
Enzymes [BR:
aoz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUE56_06960 (dnaE)
DNA replication proteins [BR:
aoz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUE56_06960 (dnaE)
DNA repair and recombination proteins [BR:
aoz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUE56_06960 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
QKS50241
UniProt:
A0A6N1AEU0
LinkDB
All DBs
Position
unnamed3:complement(677056..680547)
Genome browser
AA seq
1163 aa
AA seq
DB search
MPHADFIHLRVHSAYSLSEGAIKVKELVKLCLKQQMPAVAVTDTGNLFGALEFALAASDA
GVQPIIGTVLGITRVGPAQTKPGLPGKAAATPDQLVLLCQNEEGYRNLTALVSKAFLESD
PLAGPQVTLDALEGRSAGLIALTGGPGGSIGRLLHEGQKDLALEVLQKLKRLFPGRLYVE
LQRHEGGRGHFATVENAVEPALIDLAYAHGLPLVATNDCYFATADMYEAHDALLCIAEGA
YLSQEDRRRLTPDHRFKSAEEMRLLFADLPEAVDNTVAIARRCSFLLKPIKPILPPFACE
GGRTEDDELRAQSRAGLEMRLEKVVFTPDMTPEQREETRKTYFERLEFELDVIVKMKFPG
YFLIVSDFIKWAKNHDIPVGPGRGSGAGSVVAWALTITDLDPLRFGLLFERFLNPERVSM
PDFDIDFCQDRREEVIRYVQNKYGYDRVAQIITFGKLQARAVLRDVGRVLQMPYGQVDKI
CKMVPNNPANPVTLQQALDSEEMLRQARDSDDTVRHLIDIALKLEGLYRHASTHAAGVVI
ADRPLQELVPLYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKTLTVLKTAVDLIPEKPD
LTTVPLDDEKSYQLLSRAEATGVFQLESSGMRDVLRRLKPNRLEDIIALVSLYRPGPMDN
IPKYIRVKNGEEKADYMHDSLEGILKETFGIMIYQEQVMQIAQVLSGYSLGGADLLRRAM
GKKIKEEMDNQRKIFCDGAEARGVKADLASMIFDQVMKFAGYGFNKSHAAAYALVAYHTA
YLKANHPVEFMAASMTLDLGNTDKLNIFRQELLRLRIKLLSPDINRSDSIFGVEQLPDGT
KAVRYALAAVKGVGLPAMKAVVEERRKNGPFRSLFDFARRLDLKTINKRQLENLTCAGAF
DGLNPNRAQVHAALESIISYAQTEAAERAGGTDNLFGRGEGGLPEPRLPKVKEWEQLEKL
NHEFGAIGFHLSAHPLDAYSGPLGRMKVVRSAELQTAIAKGGSTRYKMAGIIVSKKEKTA
KSGNRFAFVELSDTTGSYEVMLFSEVLAANRAMLEPNSPVLMTVDAQLNGEEVRLTCQEI
KPLEEAVASVSAGLRVVLRDPGPIEHLRATLDRLSRGKSRINVLVEVDPLKEIEIELPGS
YTITAQSRSALKAVPGVVEVAEL
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgccccacgccgacttcatccacctgcgcgtgcattccgcctattcgctgtcggaaggc
gccatcaaggtgaaggagctggtcaagctctgcctgaaacagcagatgccggccgtcgcg
gtcaccgacaccggcaacctgttcggcgcgctggaattcgcgctggcggcatccgatgcc
ggcgtgcagccgatcatcggcaccgtgctgggcatcacccgcgtcggtcccgcccagacg
aagcccggcttgcccggcaaggcggcggccacccccgaccagctcgtcctgctctgccag
aacgaggagggttaccgcaacctgacggcgctggtgtccaaggccttcctggagtcggac
ccgctggccggcccgcaggtgacgctggacgcgctggaggggcggtccgccgggctgatc
gcgctgaccggcggccccggcggctccatcggacggctgctgcacgaggggcagaaggat
ctggcgctggaggtgctgcaaaagctgaaacgcctcttccccggccgcctctatgtcgag
ctgcagcggcacgagggcgggcgcggccatttcgccacggtggagaacgccgtcgagccg
gcgctgatcgacctcgcctatgcccacggcctgccgctggtcgccaccaacgactgctat
ttcgccaccgcggacatgtacgaggcgcacgacgcgctgctctgcatcgccgagggcgcc
tatctcagccaggaggaccgccgccgcctgacccccgaccaccgcttcaagtcggcggag
gagatgcggctgctgttcgccgacctgccggaggcggtggacaacacggtggccatcgcc
cggcgctgctccttcctgctgaagccgatcaagccgatcctgccgccgttcgcctgcgaa
ggcggccgcaccgaggatgacgagttgcgcgcccagtcgcgcgccggcctggagatgcgg
ctggagaaggtcgtcttcacccccgacatgacgccggaacagcgcgaggaaacccgcaag
acctatttcgagcggcttgagttcgagctggacgtcatcgtcaagatgaagttccccggc
tacttcctgatcgtgtcggacttcatcaaatgggcgaagaaccacgacatccccgtcggc
cccggccgcggttcgggtgccggctccgtcgtcgcctgggccctgaccatcaccgacctc
gacccgctgcgcttcggcctgctgttcgagcgtttcctgaaccccgaacgcgtgtcgatg
cccgacttcgacatcgacttctgccaggaccgccgcgaagaggtcatccgctacgtccag
aacaagtacggctacgaccgcgtcgcccagatcatcaccttcggtaagctgcaggcgaga
gccgtgctgcgcgacgtaggccgcgtgctgcagatgccctacgggcaggtcgacaagatc
tgcaagatggtgccgaacaacccggccaacccggtgaccttgcagcaggcgctggacagc
gaggagatgctgcggcaggcacgcgacagcgacgacaccgtgcgccatctgatcgacatc
gcgctgaagctggaagggctctaccgccacgcctcgacccacgccgccggcgtggtgatc
gccgaccggccgctgcaggagctggtgccgctgtaccgagacccgcgctccgacatgccg
gtcacccagttcaacatgaagtatgtcgaacaggccggtctggtgaagttcgacttcctg
ggattgaagacgctgaccgtgctgaagacggcggtggatctgatccccgagaagccggac
ctgaccaccgttccgctggacgacgagaagagctaccagctgctcagccgggccgaggcg
accggcgtgttccagctggaaagctcgggcatgcgcgacgttctgcgccggctgaagccg
aaccggctggaggacatcatcgcgctggtgtcgctctaccgtcccggcccgatggacaac
atcccgaaatacatccgggtgaagaacggcgaggaaaaagccgactacatgcatgacagc
ctggaaggcatcctgaaggagaccttcgggatcatgatctaccaggaacaggtcatgcag
atcgcccaggtgctgtccggctattcgctgggcggcgccgatcttctgcgccgcgccatg
ggcaagaagatcaaggaggagatggacaaccagcgcaagatcttctgcgacggcgcggag
gcgcgcggcgtcaaggccgatctggccagcatgatcttcgatcaggtcatgaagttcgcc
ggctacggcttcaacaagtcccacgccgccgcctacgccctggtcgcctatcacaccgcc
tatctgaaggcgaaccatccggtggagttcatggcggcgtcgatgacgctcgacctcggc
aacaccgacaaactgaacatcttccgccaggagctgttgcggcttcgaattaagctgctg
agtccggacatcaacagatccgactccatcttcggggtggaacagctgcccgacggcacc
aaggcggtgcgttacgcgctcgccgccgtcaagggcgtcggcctgcccgcaatgaaggcg
gtggtggaggagcgacggaagaacggtccgttcaggagcctgttcgacttcgcccgccgg
ctcgatctgaaaaccatcaacaagcgccagcttgagaatctcacttgcgccggtgccttc
gatgggctgaaccccaaccgcgcccaagtccatgccgcactcgaaagcatcattagctat
gctcaaaccgaggccgctgagcgcgcgggtggcactgataacctcttcggccgcggggag
ggcggccttccggaaccaagactgcccaaagttaaggaatgggaacagctagaaaagctg
aaccacgagttcggcgccatcggcttccatctgtcggctcaccctctagatgcctattcc
ggcccgctgggccgcatgaaggtggtgcgttcggccgaactccagaccgccatcgcgaag
ggcggctccacccgctacaagatggccggcatcatcgtctcgaagaaggagaagaccgcc
aagtctggcaaccgcttcgccttcgtcgagctgtcggacaccactggcagctatgaggtg
atgctgttctcggaggtgctggcggctaaccgcgccatgcttgagcctaatagcccggtg
ctgatgacggtggacgcccaattgaacggcgaggaggtccgcctgacctgccaggagatc
aagccgctggaggaggccgtcgcctcggtcagcgccggcctgcgcgtcgtgctgcgcgac
cccggcccgatcgagcatctgcgcgccacgctcgaccggctgtcgcgcggcaagagccgc
atcaacgtgctggtggaggtcgacccgctgaaggaaatcgagatcgaacttcccggcagc
tacaccatcaccgcgcagagccgttcggccctgaaggcggtgccgggcgtggtggaggtg
gcggaactgtga
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