Azospirillum oryzae: HUE56_10425
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Entry
HUE56_10425 CDS
T06782
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aoz
Azospirillum oryzae
Pathway
aoz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUE56_10425 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoz03021
]
HUE56_10425 (rho)
03019 Messenger RNA biogenesis [BR:
aoz03019
]
HUE56_10425 (rho)
Transcription machinery [BR:
aoz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HUE56_10425 (rho)
Messenger RNA biogenesis [BR:
aoz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HUE56_10425 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
QKS50940
UniProt:
A0A1X7G1Z4
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All DBs
Position
317086..318342
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AA seq
418 aa
AA seq
DB search
MHLQELKCKSPAELLAFAEELQIENASTLRKQDMMFAILKQLAENDIPIFGDGVLEVLQD
GFGFLRSPEANYLPGPDDIYVSPSQVRRFGLRTGDTVEGQIRSPKDGERYFALLKVNTIN
FDTPDKVRHRINFDNLTPLYPEERIRMEVEDPTKKNLTGRIVDLVAPLGKGQRGLIVAPP
RTGKTVMLQNIAHSVATNHPEAYLIVLLIDERPEEVTDMARSVRGEVISSTFDEPATRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNVEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKLSDKRTFPAIDI
SKSGTRKEELLVDKGTMSKMWILRRILMPMGVTDAVDFLVDKLKHTKSNNEFFESMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccaagagctgaagtgcaaaagccccgccgaactgctggcgttcgcggaggag
cttcagatcgagaacgcgagcacgctgcgcaagcaggacatgatgtttgcgatcctgaag
caactggccgaaaacgacattccgatcttcggcgatggcgtgttggaggtgctgcaggac
gggttcggcttcctgcgctcgccggaggccaattatctgccgggtcccgacgacatctat
gtcagtcccagtcaggtgcgccgcttcggcctgcgcaccggcgacacggtggaggggcag
atccgttcgcccaaggacggtgagcgctatttcgccctgctgaaggtcaacaccatcaac
ttcgatacgccggacaaggtccgtcaccgtatcaacttcgacaacctgacgccgctctat
ccggaagaacgcatccggatggaggtcgaggacccgaccaagaagaacctcaccggtcgc
atcgtcgatctggtggcgccgctgggcaaggggcagcgcgggctgatcgtggcgccgccg
cgcaccggcaagacggtgatgctgcagaacatcgcccactcggtcgccaccaaccacccc
gaagcctatctgatcgtcctcttgatcgacgagcgtccggaagaagtgacggacatggcc
cgctcggtccgcggcgaggtcatcagctccaccttcgacgagccggcgacccgccacgtc
caggtcgcggaaatggtgatcgagaaggccaagcggctggtcgagcacaagcgcgacgtg
gtcatcctgctggacagcatcacccgtctggcccgggcctacaacacggtggtgccgtcg
tccggcaaggtgctgaccggcggtgtcgacgccaacgccctgcagcggcccaagcgcttc
ttcggtgccgcccgcaacgtggaagagggtgggtcgctgaccatcatcgccaccgcgctg
atcgataccggcagccgcatggacgaggtgatcttcgaagagttcaagggtaccggcaac
tcggaaatcgtgctggaccgcaagctctccgacaagcgcaccttcccggccatcgatatc
tccaagtcgggcacccgcaaggaggaactgctggtcgacaagggcaccatgtcgaagatg
tggatcctgcggcgcatcctgatgccgatgggcgtgaccgacgcggtggacttcctggtc
gacaagctgaagcacaccaagtcgaacaacgagttcttcgagagcatgaaccagtag
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