Azospirillum oryzae: HUE56_11910
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Entry
HUE56_11910 CDS
T06782
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aoz
Azospirillum oryzae
Pathway
aoz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUE56_11910 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoz03019
]
HUE56_11910 (recQ)
03400 DNA repair and recombination proteins [BR:
aoz03400
]
HUE56_11910 (recQ)
Enzymes [BR:
aoz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUE56_11910 (recQ)
Messenger RNA biogenesis [BR:
aoz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUE56_11910 (recQ)
DNA repair and recombination proteins [BR:
aoz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HUE56_11910 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
HRDC
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QKS51205
UniProt:
A0A6N1AHG1
LinkDB
All DBs
Position
617939..619855
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AA seq
638 aa
AA seq
DB search
MDSLFSYSNPGASDDAPGQRPATALDALRTVFGYDSFRGQQADIIDHVVRGGDALVLMPT
GGGKSLCYQIPALVRDGVTVVVSPLIALMRDQVTALRELGVRAAFLNSSLGPAEAREVER
AMVQGEIDLVYVAPERLVTPRFLDLLDRTRLALFALDEAHCVSQWGHDFRPEYLQLSILH
ERHPMVPRIALTATADVQTRAEIKDKLGLTDARVFLSSFDRPNITYRVVPKKSERQQMLA
FLRENHPEDAGIIYCMSRNKVEDVAAWLNSQGREALPYHAGLPAEVREANQDRFIKSEGL
VMVATVAFGMGIDKPNVRFVCHLDPPKSLEAYYQETGRAGRDGLPANAWMAYGMADVVML
RQMLEQSEAGDSHRRVERGKLEALLGFCETPDCRRQVLLNYFNETLPEPCGNCDTCLDPV
ETWDGTIAAQKALSAVYRTGQRYGAGHLIDVLVGNATEKVVQQNHDQLKTFAVGKDLTKV
EWQSVYRQLVATGLLTVDLEGYGGFRLTDAGVAVIKGQRVVKLRKDPVLERRRGVHDALR
RHTARGGSLSGEGVSRSGARGALSAADDALWHALKDCRTALAKAQSVPPYVIFHDSTLLE
MVAQRPRDHAAFAHLPGVGGRKLERYADAFLEVIRQHG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
gtggattcgttgttttcctacagcaacccgggtgcgtcggacgatgcccccggtcaacgg
ccggccacggcgctcgacgcgctgcggacggtgttcggctacgactccttccgcggccag
caggccgacatcatcgaccatgtggtgcgcggtggcgacgcgctggtgctgatgccgacc
ggcggcggcaagtcgctgtgctaccagatcccggcactggtgcgcgacggcgtgacggtg
gtggtctcaccgctgatcgccctgatgcgcgatcaagtgacggcgctgcgggagcttggc
gtgcgcgccgccttcctcaactcctccctcgggccggcggaggcgcgggaggtggagcgg
gccatggtgcagggcgagatcgacctcgtctatgtcgcgccggaacggctggtgacgccg
cgcttcctcgatctgctcgaccgcaccaggctggcgctgtttgcgctggacgaggcgcat
tgcgtgtcgcagtgggggcatgatttccgccccgagtatctgcagctgtcgatcctgcac
gaacgccacccgatggtgccgcgcatcgcgctgaccgcgacggccgacgtgcagacccgc
gccgagatcaaggacaagctggggctgaccgacgcccgcgtcttcctgtccagcttcgat
cggccaaacatcacatatcgcgtggtgccgaagaagagcgagcgccagcagatgctggcc
ttcctgcgcgagaaccacccggaagacgccggtatcatctattgcatgtcgcgcaacaag
gtggaggatgtcgcggcctggctgaacagccaaggccgcgaggctctgccctaccatgcc
gggctgcccgccgaggtgcgcgaggccaaccaggaccgcttcatcaagagcgagggtctg
gtgatggtcgccacggtggccttcggcatgggcatcgataagccgaacgtccgcttcgtc
tgccacctcgacccgcccaagagcctggaagcctattaccaggagaccggccgcgccggc
cgcgacggcctgcccgccaatgcctggatggcctacggcatggccgacgtggtgatgctg
cgccagatgctggagcagtcggaagccggcgacagccaccgccgggtggagcgcggcaag
ctggaggccctgctcggcttctgcgagacgccggactgccgccgtcaggtgctgctgaac
tatttcaacgagacgctgccggagccctgcggcaactgcgacacctgcctggacccggtc
gagacctgggacggcaccatcgccgcgcagaaggcattgtcggcggtctaccgcaccggt
cagcgttacggtgccggtcacctgatcgacgtgctggtcggcaatgccaccgagaaggtg
gtgcagcagaaccatgaccagctgaagaccttcgccgtcggcaaggatttgaccaaggtc
gaatggcagtcggtctaccgccagctggtggcgaccggactgttgaccgtcgatctggag
ggctatggcggcttccgcctgaccgatgccggggtcgccgtcatcaaggggcagcgggtg
gtgaagctgcgcaaggacccggtgctggagcgccgccgcggcgtccatgacgcgctgcgc
cgccacaccgcgcggggtggaagcttgagcggggagggcgtgtcgcgctcgggcgcccgc
ggtgcgttgtcggcggccgacgatgcgctgtggcacgcgctgaaggactgccggacggcg
ctggccaaggcgcagagcgtgccgccctacgtgatcttccacgacagcacgctgttggaa
atggtggcccagcgcccgcgcgaccacgccgccttcgcccatctgccgggggtcggcgga
cgtaagctggaacgctacgccgacgccttcctggaggtgatccggcagcacggatga
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