Azospirillum oryzae: HUE56_22390
Help
Entry
HUE56_22390 CDS
T06782
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
aoz
Azospirillum oryzae
Pathway
aoz02020
Two-component system
aoz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aoz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HUE56_22390
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUE56_22390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
aoz02022
]
HUE56_22390
Two-component system [BR:
aoz02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
HUE56_22390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_16
AAA_5
Mg_chelatase
HTH_29
AAA
VpsR
HTH_23
MCM
AAA_7
AAA_2
Motif
Other DBs
NCBI-ProteinID:
QKS53283
UniProt:
A0A6N1APE2
LinkDB
All DBs
Position
unnamed5:7265..8701
Genome browser
AA seq
478 aa
AA seq
DB search
MSSPKKRRILLIEDTVPLAKLYIEFLRADAHEVVHCTRGREALDAAAASPPDAVILDLKL
PDMDGLEVLQALQARDASVSVVIITAHGSIDLAVEAMKLGAFDFIVKPFNADRLNLTLRN
ALERRTLARMVEGYRKDLDRGRFHGFIGSSPEMQAVYRTIESVAASRANVFITGESGTGK
EVAAQAIHRASPRRDGAFVALNCAAIPKDLLESEIFGHVKGAFTGAAGDRPGAALLADGG
TLFLDEICEMPFDLQSKLLRFVQTGTVSPVGSGREERVDVRFVAATNRDPLAEVQAGRFR
EDLYYRLHVIPLALPPLRDRGDDVIEIARSFLIDYAREEGKALSAFAPEVEARLRAHDWP
GNVRQLQNVVRNVVVLNDGPQVTVGMLPPMGGPAIGNPDAGAFPCAACGSPAADAAEEDA
AVQPLWRVEKDMIQKALRLTGDDVPRAALMLEISPSTIYRKLQQWRVAEARGAGEGAA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctctcccaagaagcgccgcatcctgctgatcgaggatacggtcccgctcgccaag
ctctatatcgagttcctgcgcgcggacgcccatgaggtcgtgcattgcacccgcgggagg
gaggcgctggacgccgcggcggcatcgccgcccgatgcggtcatcctggacctgaagctg
ccggacatggacgggctggaggtgctccaggcgctccaggcccgcgacgcgagcgtttcg
gtggtcatcatcaccgcccatggctccatcgatctggcggtggaggcgatgaagctcggt
gccttcgacttcatcgtgaagcccttcaacgccgaccggttgaacctgaccctgcgcaac
gcgctggaacggcggacgctggcgcgcatggtggagggataccgcaaggacctggaccgc
gggcgcttccatggcttcatcggcagctcgccggaaatgcaggcggtctaccgcaccatc
gaaagcgtggccgccagccgcgccaacgtcttcatcaccggagagagcgggaccggcaag
gaggtcgcggcccaggccatccaccgcgccagcccgcggcgcgacggcgccttcgtggcg
ctgaactgcgcggccatcccgaaggatttgctcgaatcggagatcttcggccatgtgaag
ggcgccttcaccggggcggcgggcgaccggccgggggcggcgctgctggccgacggcggc
acgctgttcctggacgaaatctgcgagatgccgttcgacctgcagagcaagctcctgcgt
ttcgtccagaccggcacggtcagcccggtcggcagcggacgggaggagcgggtggacgtg
cgcttcgtcgccgccaccaaccgtgatccgctggccgaggttcaggccggccgtttccgg
gaggacctctattaccgcctgcatgtcatcccgctggccttgccgccgctgcgcgaccgc
ggcgacgacgtgatcgagatcgcgcgctccttcctgatcgattatgcgcgggaggagggc
aaggcgctgtcggccttcgccccggaggtggaagcgcggctgcgcgcccatgactggccc
ggcaacgtgcggcaattgcagaatgtcgtccgcaacgtcgtggtgctgaacgacgggccg
caggtcaccgtgggcatgctgccgccgatgggcggtccggcgatcggcaatcctgacgcc
ggcgccttcccgtgcgccgcctgcggttcgccggccgccgatgcggcggaggaggatgcc
gccgtgcagccgctgtggcgggtcgagaaggacatgatccagaaggcgctgcggctgacc
ggcgacgatgtgccgcgcgccgccctgatgctggagatcagcccgtccaccatctaccgc
aaacttcagcaatggcgcgtcgccgaggcccgcggcgccggggagggtgccgcttga
DBGET
integrated database retrieval system
