Azospirillum oryzae: HUE56_28055
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Entry
HUE56_28055 CDS
T06782
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aoz
Azospirillum oryzae
Pathway
aoz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HUE56_28055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoz03400
]
HUE56_28055
Enzymes [BR:
aoz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HUE56_28055
DNA repair and recombination proteins [BR:
aoz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HUE56_28055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
AAA_16
NTPase_1
PIF1
Helicase_RecD
nSTAND3
MeaB
HHH_2
AAA_22
NPHP3_N
AAA_5
CbiA
AAA
TsaE
RsgA_GTPase
NACHT
UvrD-helicase
MobB
ATP_bind_1
TraI_hel_assoc_N
SLFN-g3_helicase
AAA_28
NB-ARC
T2SSE
DEAD
AAA_29
Rad17
cobW
Motif
Other DBs
NCBI-ProteinID:
QKS54310
UniProt:
A0A6N1ARU1
LinkDB
All DBs
Position
unnamed6:complement(888395..890617)
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AA seq
740 aa
AA seq
DB search
MPNPSPSAQTRPTAENREPLSGLVERVTYHNAENGYCVLRVKVRGHKELVTVVGHAASVS
PGEHVHASGLWEQHREHGPQFRATFLRSAPPTTLEGIEKYLGSGLIKGIGPVYGRKLAQA
FGERVFDVIETQPQRLIEVPGIGPKRIAKITRAWAEQKIVREIMVFLQSHGVSTSRAVRI
FKTYGADAIPLVTENPYRLARDIRGIGFKTADTIAERLGIPKDSMIRARAGVSYALLEAV
SNGHCGLPEDDLLKLAEELLDIPQPTLVEAILLEVKEGSVVADTVRERRCIFLMHLWHAE
REIADRLTVLAEGEPSWGLMDSGKAVPWVEEKLGIALATSQREAVAKALVSKVLVVTGGP
GVGKTTIVRSILKILAAKGVTVALCAPTGRAAKRLSETTGLGAKTIHRLLETDPANGGFK
RGAEAPLDCDLLVVDETSMVDVPLMAALLRALPRQAALLLVGDVDQLPSVGAGQVLADII
GSGAVPVARLTEIFRQAAESRIVTNAHRVNAGRMPDLEVPKDGDSDFYFVAADDPEIGAR
KVVEIVCDRIPRRFGLDAVRDVQVLAPMQRGLLGARGLNLALQEALNGDGSKPSIEKFGW
TYRVGDKVMQIENDYEKEVYNGDIGTIVGLDAEEGELAIDFDGRLIPYPFGELDQVTLAY
ATTIHKSQGSEYPAVVIPVAMTHYMMLRRNLIYTGITRGKRLVVLVGQKRALALAVRTSD
EGCRWSKLRELLFGRTEPSL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacccatcgccgtctgcccaaacccgtccgaccgccgaaaaccgtgagccactc
tccgggctggtggaacgcgtcacctaccacaacgccgagaacggttactgcgtgcttcgg
gtcaaggtccgtggccacaaggaattggtcaccgtggttggccatgccgcctccgtgtcg
cccggtgagcatgtccatgcatcgggtctgtgggagcagcaccgcgaacacgggccccag
ttccgcgccaccttcctgcgctcggccccaccgaccactctggagggcatcgagaagtac
cttggctccggcctgatcaaaggcatcggcccggtctatggcaggaagctggcgcaggcg
ttcggtgagcgcgtgttcgacgtcatcgaaacccagccccagcgcctgatcgaggtcccc
ggcatcggtccgaagcgcatcgccaagatcacccgcgcctgggccgagcagaagatcgtc
cgggagatcatggtcttcctgcaaagccacggcgtcagcacctcccgcgccgtgcggatt
tttaagacctacggtgccgacgccatcccgctggtgacggagaatccctaccgtctcgcc
cgcgacatccgcggcatcggcttcaagaccgccgacaccatcgccgagcggctgggcatc
ccgaaggactcgatgatccgggcgcgggcgggtgtctcctacgcgctgctggaggcggtg
tcgaacgggcattgcggcctgcccgaggacgacttgctcaaactggccgaggagcttctg
gacatcccgcagccgacgctggtcgaagccatcctgctggaggtcaaggagggcagcgtg
gttgccgacacggtcagggagcggcgctgcatcttcttgatgcacctgtggcatgccgag
cgggagatcgccgaccggctgacagtgctggccgagggggaaccgtcctgggggctgatg
gacagcggcaaggccgttccctgggtcgaggagaaactcggcatcgcgctcgcgaccagc
caacgggaggcggttgccaaagcgttggtctccaaggtgctggtggtgaccggcggcccc
ggcgtcggcaagacgaccatcgtccgctcgatcctaaagatcctcgccgccaagggagtg
acggtcgccctctgcgccccaacgggccgggcggcaaagcgactgtcggagaccaccggc
ctgggagccaagacgatccatcggctgttggagaccgacccggccaacggcggcttcaag
cgtggcgccgaggcgccgctcgactgcgacctgctggtggtggacgaaacctcgatggtc
gatgtcccgctgatggcggcgctgctgcgcgccctgccgcgtcaggccgccttgctgctg
gtcggtgacgtcgaccagttgccctcggtgggcgccggccaggtgctggccgacatcatc
ggctcgggcgcggttccggtggcgcggctgaccgagatcttccggcaggcggcggaaagc
cggatcgtcaccaacgctcaccgcgtcaacgcaggccgtatgcccgatctggaggtgccg
aaagacggcgatagcgacttctacttcgtcgccgccgacgatccagagattggcgcccgc
aaggtggtcgagatcgtgtgtgaccgtattccgcggcgcttcggcctggatgcggtgcgc
gacgttcaagtcctcgccccgatgcagcgcggcctcctcggcgcgcgtgggctaaacctt
gctctccaggaggctctgaacggcgatggatcgaagccgtccatcgagaagttcggctgg
acctaccgggtcggcgacaaggtgatgcagatcgagaacgactacgaaaaggaggtctac
aacggcgacatcggcaccatcgtcggcctcgatgccgaggagggcgaactggccatcgac
ttcgatggccgcctcatcccctatcccttcggcgagttggatcaggtgacgctggcctac
gcgacgacaatccataaatcccagggatcggagtatccggccgtcgtcatccccgtggcg
atgacgcactacatgatgctgcggcggaacctgatctacaccggcatcacccgcggcaag
cggttggtggtgctggtcggccagaagcgggctttggctctggccgttcgcacgtccgat
gagggatgccgctggtcgaagctgcgggagttgctgtttggccgcacggaaccgagtctc
tag
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