Actinobacillus pleuropneumoniae AP76 (serotype 7): APP7_1391
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Entry
APP7_1391 CDS
T00717
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
apa
Actinobacillus pleuropneumoniae AP76 (serotype 7)
Pathway
apa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APP7_1391 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apa03400
]
APP7_1391 (mfd)
Enzymes [BR:
apa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APP7_1391 (mfd)
DNA repair and recombination proteins [BR:
apa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
APP7_1391 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFD_D3
UvrB_inter
CarD_TRCF_RID
DEAD
ResIII
UB2H
Motif
Other DBs
NCBI-ProteinID:
ACE62043
UniProt:
B3GYB9
LinkDB
All DBs
Position
complement(1554162..1556300)
Genome browser
AA seq
712 aa
AA seq
DB search
MTFHFNLNLPEIGGKYQDHQTLGNLIGHADTLVIAQATEQFNGLSVVVTPDTRTALRLEK
ALMQFSKLPVSVFPDWETLPYDNFSPHQDIISARLSALFHLQKGNKQIFLLPISTLLQKV
CPPSYLANNVLLIKKGDRFSIQSLRLQLENAGYRAVEQVLEYGEYAVRGALLDLYPMGAE
SPFRLDFFDDEIDSIRTFDADSQRTIAEINEMNLLPAHEFPTDSNGIEHFRSKFREQFGE
IRREPEHIYQQVSKGILNAGIEYWQPLFFEEMASLFDYLAENTLFITFDGIAEKAEQFHK
DTEQRYESRRVDPMRPLLPPDKLWFSVDEVNRHLKDYPRLTLSAEKVRKSAAKQNANIEK
LPELAINSQLKDPFETFNKFRGKFDGRILFSVESEGRRETLLELLAPLKLKPKQVKSFAE
IDSQISLIISPLDQGFIIENTSGQNLAIICETDFLGEKVQTKRAEKNRKTVNPDTLIRNL
AELKIGQAVVHLENGVGRYAGLTVLDAGGIKAEYLVLQYANEAKLYVPVASLHLISRYIG
GADETAPLHKLGSEAWAKTRQKAAEKIRDVAAELLDVYAKRESQKGFAFAYDRDSFMQFS
HTFPFEETEDQKTAINAVISDMCLPKAMDRLVCGDVGFGKTEVAMRATFLAVENHKQVAV
LVPTTLLAQQHFENFKDRFANYPINVEVLSRLKLPKSKKQFWKRWRKAKWIF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacattccatttcaatttaaatctgccggaaatcggcggcaaatatcaagatcaccaa
acgctcggcaatctaatcgggcacgccgatacgcttgttattgcgcaagctacggaacaa
tttaacggtttaagcgtggtagtcacgccggatacccgtaccgcattacgtcttgaaaaa
gccttaatgcaattcagtaaattaccggtttccgtctttccggattgggaaacactaccg
tacgataatttttcgccgcatcaagatattatttccgcgcgcctttcggcactgtttcac
ttacagaaaggcaataaacagatttttctgttgccaatcagcacccttttacaaaaagtt
tgtccgccgagttatctcgcaaataatgtactactgattaaaaaaggcgatcgtttttca
attcaatcgttacgtttacagctggaaaatgccggttatcgtgcagtggaacaagtgttg
gaatacggcgaatatgccgtacgtggcgcattacttgacctctatccgatgggagcggaa
agcccgttccgcttggatttttttgatgatgaaatcgattcgatccgcactttcgatgcg
gacagtcagcgtacgatagccgagattaacgaaatgaatttactaccggcacacgagttc
ccgactgatagtaatgggatcgagcattttagaagcaaatttcgtgaacaattcggtgag
attcgtcgtgaaccggagcatatttatcagcaagtcagtaaagggatcttgaacgcaggg
attgaatattggcagccgcttttctttgaagaaatggcaagcctatttgattatttggcg
gaaaataccttatttattaccttcgacggtattgcggaaaaagcggaacagttccacaag
gatactgaacaacgctatgaaagtcgccgagtcgatccgatgcgtccgctactgccgccg
gacaaattatggttctcggttgatgaagtcaatcgtcatctaaaagattatccacgcctg
acattaagtgcggaaaaagtcagaaaatcggcggctaaacaaaatgcgaatattgagaaa
ttgccggaattagcgattaactcgcagttaaaagatccgtttgagacatttaataaattc
cgtggaaaatttgacgggcggattttattttcagtagaaagtgaaggtcgccgagaaact
ttgctcgaattacttgcgccgttaaaactcaagccgaaacaagttaaatcgttcgcagaa
attgattcgcaaatttccctgattatttcaccgcttgatcagggctttatcattgaaaat
acaagcggtcaaaatttagcaattatttgcgaaacggattttcttggtgaaaaagtccaa
accaagcgagcggagaaaaaccgaaaaacagtcaatccggatacgctaatccgtaacctt
gcggaactgaaaatcgggcaagcggtggtgcatttggaaaacggtgtcgggcgttatgca
gggctaaccgtactggatgcaggcggaattaaagcggaataccttgtgttgcaatatgca
aacgaggcgaagctctatgtgccggtggcatcgctacatctgatttcccgttatatcggc
ggtgcggatgaaacggctccgttgcacaaactcggttcggaagcgtgggcgaaaacacgc
caaaaagcggcggagaaaattcgggatgtcgcggcggaattacttgatgtgtatgcaaaa
cgagaatcgcaaaaaggctttgcgtttgcctacgatcgagacagctttatgcagtttagc
cacactttcccgtttgaagaaaccgaagatcagaaaactgcaatcaatgcggtcattagt
gatatgtgcttgccaaaagcaatggatcggctagtttgtggtgatgttggcttcggtaaa
accgaagtggcgatgcgagcgaccttcttagcagttgaaaaccataaacaagttgccgtg
cttgtgccgaccacgctattggcacaacaacatttcgagaatttcaaagaccgttttgcc
aactatccgattaatgttgaggtgctttctcgtttaaaactgccaaagagcaaaaagcaa
ttttggaaaaggtggcggaaggcaaagtggatattctag
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