Actinobacillus pleuropneumoniae AP76 (serotype 7): APP7_1788
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Entry
APP7_1788 CDS
T00717
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
apa
Actinobacillus pleuropneumoniae AP76 (serotype 7)
Pathway
apa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
APP7_1788 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apa03021
]
APP7_1788 (rpoB)
03400 DNA repair and recombination proteins [BR:
apa03400
]
APP7_1788 (rpoB)
Enzymes [BR:
apa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
APP7_1788 (rpoB)
Transcription machinery [BR:
apa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
APP7_1788 (rpoB)
DNA repair and recombination proteins [BR:
apa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
APP7_1788 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
SPG4
Motif
Other DBs
NCBI-ProteinID:
ACE62440
UniProt:
B3GYV4
LinkDB
All DBs
Position
1982052..1986137
Genome browser
AA seq
1361 aa
AA seq
DB search
MTVGLCNLNQIRKSEGYLAMAYSYSEKKRIRKSFGKRPQVLNVPYLLTIQLDSYEKFIQR
DSDGQQGLEAAFRSVFPIVSNNGSTELQYVSYELGEPVFDVRECQIRGTTYAAPLRVKLR
LVTFDREAAAGTVKDIKEQNVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDK
GKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLYARIDRRRKLPATIILRALGYTTEEIL
SMFFDKVNFEIQDNKLLMTLVPERLRGETAAFDIEANGKVYVERGRRITARHIRTLEKDG
ITQIEVPVEYIVGKVAAKDYVDLSTGELVCPANMEISMEMLAKLSQAGYKEIEVLFTNDL
DHGPYISETLRVDPTYDRLSALVEIYRMMRPGEPPTKEAAEALFDNMFFSADRYDLSAVG
RMKFNRSLNLEEGVGSGILSNDDITGVMKKLIEIRNGRGEVDDIDHLGNRRIRSVGEMAE
NQFRIGLVRVERAVRERLSLGDLDGITPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPL
SEVTHKRRISALGPGGLTRERAGFEVRDVHTTHYGRLCPIETPEGPNIGLINSLSVYART
NNYGFLETPFRKVVNGQVTEDIEYLSAIEEGNYVIAQANSNLDENFRFTDTYVTCRGEHG
ESGLYKPEDIHYMDISTQQVVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLV
GTGMEKPIALDSGVAIVAKRGGIVQRVDASRIVVKVNEDETIPGEAGIDIYNLIKYTRSN
QNTCINQIPCVNLGEPVARGEILADGPSTDLGELALGQNIRVAFMPWNGYNFEDSMLVSE
RVVQEDRFTTIHIQELSCVARDTKLGAEEITADIPNVGESALSKLDESGIVYVGAEVKGG
DILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGTSGTVIDVQVFTRDGVE
KDKRALEIEEMQLKEAKKDLTEELEILEAGLFTRVRNLLIEGGVSEAELDKVAREKWLEQ
TLDDEAKQNQLEQLAEQHEELRKEFERKLEIKRNKIIQGDDLAPGVLKVVKVYLAVRRQI
QPGDKMAGRHGNKGVISKINPVEDMPYDENGQPVEIVLNPLGVPSRMNIGQILETHLGLA
AKGIGDQINAMIKQQQSVAKLREYIQKAYDLGHGSQSVDLSTFTDEEVLRLAENLRKGLP
LATPVFDGAHESEIKGLLELGGLPTSGQITLFDGRTGEKFERPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGR
TKMYKNIVDGTHQMEPGMPESFNVLLKEIRALGIDMELDEE
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcggattgtgtaacctcaaccaaataagaaaatcagaaggctatctagcaatg
gcatattcatattccgagaaaaagcgtattcgtaagagctttggtaaacgtccacaagtt
cttaacgtaccttatctattaacaattcagcttgattcttacgagaaatttattcaaaga
gattcagatggacaacaaggtttagaagcggcattccgttctgtgttcccgattgtaagc
aacaacggaagcactgaattacaatacgtttcttacgaattaggagagccggtatttgat
gttcgtgaatgtcaaattcgcggtacaacctatgcggcaccattacgcgttaaacttcgt
ttagtgactttcgaccgtgaagcggcggcaggcactgtaaaagatattaaagaacaaaac
gtgtatatgggcgaaatcccattaatgaccgacaacggtactttcgttatcaacggtact
gagcgtgtaatcgtatctcagttacaccgtagtccgggcgtattcttcgattctgacaaa
ggtaaaacccactcatcaggtaaagtgctttataacgcacgtattattccttaccgtggt
tcttggttagatttcgagtttgacccgaaagacaatctttatgcacgtatcgaccgccgc
cgtaaattaccggcaactattattttacgtgctttaggttatacgaccgaagaaatctta
tcgatgttcttcgataaagtgaactttgaaatccaagataataaattattaatgacattg
gtgccggaacgcttacgtggcgaaaccgctgcgtttgatattgaagcgaacggtaaagtg
tacgttgaacgtggtcgtcgtattaccgcacgtcatattcgcacattagaaaaagacggc
attactcaaatcgaagtgccggtagagtacatcgtaggtaaagttgcagcgaaagattat
gttgatctttcaaccggagaattagtttgtccggcgaatatggaaatctcaatggagatg
ttagcgaaattatcgcaagcaggttacaaagagatcgaagtactatttactaacgactta
gatcacggtccgtatatttctgaaaccttacgtgttgatccaacttatgaccgcttaagt
gcattagtagaaatctaccgtatgatgcgtccgggcgagccaccgacaaaagaagcggcg
gaagcgttattcgacaatatgttcttctcagcagaccgttatgacttatcggcagttggt
cgtatgaagttcaaccgttcgttaaatcttgaagaaggcgtaggttcaggcattttaagt
aatgacgacattaccggcgtgatgaagaaattaattgaaatccgtaacggtcgtggcgaa
gtggacgatatcgaccacttaggtaaccgtcgtattcgttcggtaggcgaaatggctgaa
aaccaattccgtatcggtttagtgcgtgtagaacgtgccgtgcgtgagcgtttatcatta
ggcgatttagacggcattactccgcaagatttaattaatgcgaagccgatttctgcggca
gtgaaagagttcttcggttcttcacaactttcgcaatttatggaccaaaataacccgctt
tcggaggttacccataaacgtcgtatttcagcattaggtccgggcggtttaacccgcgaa
cgtgcaggctttgaggttcgagacgtacatactactcactatggtcgtttatgtccgatc
gaaacccctgaaggtccgaacatcggtttgatcaactcactttcagtatatgcgcgtact
aataactacggtttcttagaaacgccgttccgtaaagtagtgaacggtcaagtaaccgaa
gatatcgagtatttatcggcaatcgaagaaggtaactacgttatcgctcaggctaactca
aacttagatgagaatttccgttttaccgatacttacgtaacttgtcgtggcgaacacggt
gagtcaggtttatacaaaccggaagatattcactatatggatatctcaacacaacaagtg
gtttctgttgcggcagcgttaattccgttccttgagcatgacgatgcgaaccgtgcgtta
atgggtgcgaacatgcaacgtcaggctgttccgacattacgtgcggataaaccgttagtc
ggtaccggtatggaaaaaccaatcgcacttgactcaggtgtagcgattgtggcgaaacgt
ggtggtatcgttcaacgtgttgatgcctctcgtatcgtagtgaaagtaaacgaagatgaa
acgattccgggcgaagcgggtatcgacatctataacttaattaaatatacccgttcaaat
caaaatacctgtatcaaccaaattccttgtgtgaatttaggcgagccggtagcacgtggc
gagatcttagcggacggtccttcaacagatttaggtgaattagcattaggtcaaaatatt
cgtgtggcattcatgccatggaacggttataacttcgaagactcaatgttagtttctgag
cgtgtagtacaagaagatcgtttcacgacaatccacatccaagagctatcttgtgtggca
cgtgataccaaacttggtgcggaagaaattacagcggatatcccgaacgtaggcgaatcg
gcattaagcaaacttgatgaatcaggtatcgtttacgtgggtgcggaagttaaaggcggc
gacatcttagttggtaaagtaacgcctaaaggcgaaacccaattaacgccggaagaaaaa
cttttacgtgcgatcttcggtgagaaagcatctgatgttaaagattcttcattacgtgta
ccaaacggtacttcaggtacggttattgacgttcaagtatttactcgtgacggcgttgaa
aaagataaacgtgcgttagaaatcgaggaaatgcagcttaaagaagcgaagaaagattta
actgaagagttagaaattttagaagccggtttatttactcgtgttcgcaatttattaatc
gaaggcggcgtatctgaagctgaattagataaagttgctcgtgagaaatggttagaacaa
accttagatgacgaagcgaaacaaaatcaattagaacagcttgcggaacagcacgaagag
ttacgtaaagagtttgaacgtaaacttgaaattaaacgcaacaagatcatccaaggtgac
gatttagcacctggtgtgttaaaagtggttaaagtttacttagcggttcgtcgccaaatc
caaccaggtgataaaatggcgggtcgtcacggtaacaaaggtgttatctcgaaaatcaac
ccggttgaagatatgccgtacgatgaaaacggccaaccggttgagatcgtattgaacccg
ctgggcgtaccttcacgtatgaacatcggtcagatcttagaaacgcacttaggtttagcg
gcgaaaggtatcggcgaccaaattaacgcaatgatcaaacaacaacaatctgttgcgaaa
ttgcgtgaatatatccaaaaagcatacgatttaggtcacggttcacaatcagtagactta
agcacctttaccgatgaagaagtgttgcgtttagcagaaaacttacgtaaaggtttaccg
cttgcaactccggtattcgacggtgcgcatgaaagcgaaatcaaaggcttattagaatta
ggcggcttaccgacttcaggtcaaattactttatttgacggtcgtaccggtgagaaattc
gagcgtcctgtaaccgtaggttatatgtatatgctcaaattgaaccacttggttgatgac
aaaatgcacgcgcgttcaaccggttcttatagtcttgttactcaacaaccgcttggtggt
aaagcacagttcggtggtcagcgtttcggtgagatggaggtttgggcattagaagcatac
ggtgccgcttacaccttacaagaaatgctaacggttaaatcggatgacgtgaacggtcgt
acgaagatgtacaaaaacatcgtggacggcacacatcaaatggaaccgggtatgccggaa
tcattcaacgtattgttgaaagagattcgtgccttaggtattgatatggagcttgacgaa
gaataa
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integrated database retrieval system
