Actinobacillus pleuropneumoniae AP76 (serotype 7): APP7_1789
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Entry
APP7_1789 CDS
T00717
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
apa
Actinobacillus pleuropneumoniae AP76 (serotype 7)
Pathway
apa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
APP7_1789 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apa03021
]
APP7_1789 (rpoC)
03400 DNA repair and recombination proteins [BR:
apa03400
]
APP7_1789 (rpoC)
Enzymes [BR:
apa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
APP7_1789 (rpoC)
Transcription machinery [BR:
apa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
APP7_1789 (rpoC)
DNA repair and recombination proteins [BR:
apa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
APP7_1789 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ACE62441
UniProt:
B3GYV5
LinkDB
All DBs
Position
1986263..1990534
Genome browser
AA seq
1423 aa
AA seq
DB search
MKDLVKFLKAQSKSNDDFDVIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRDRMGHIELACPVAHIWFLKS
LPSRIGLILDMPLRDIERVLYFESYVVTEPGMTDLEKNQLLTEEQFLDAEERWGDEFEAK
MGAEGIQALLRDMDLEHQCEMMREELQETNSETKRKKITKRLKLLEAFQQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLVAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLHLHQCGLPKKMALELFRPFIYSKLESRGIASTIKAAKKMVEREEPIVWDILAEVIREH
PILLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNVLSPASGDPIIVPSQDVVLGLYYMTREKVNAKGEGMYFLDPREAEKAYRT
GQAELHARVKVRITEHVKNEAGELVAETKLLDTTIGRAILWMIAPKGMPFKVFNQTLGKK
AISKLINESYRRLGLKESVILADQIMYTGFAYAARSGASVGIDDMVIPAQKHEIIRAAEA
EVAEIQEQFNSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEEVINREGNPEKQASF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVITEDDCGTHEGIVMTPLIEGGDVKEALRDRV
LGRVVAEDVLKPGTEEVLIPRNTLIDEKWCDVIDAESVDVIKVRSVVTCNTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSIQVKNAGTIK
LTNAKFVTNKEGKIVLTSRNTELTVIDTFGRTKENYKVPYGAVLSKNDGAEVAVGEVVAN
WDPHTMPVISEVSGRIQFSDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPALR
LVDAQGNDILIPSTDVAAQYFLPGKAIVTLDDGAEIEVGEALARIPQESVGTKDITGGLP
RVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLVITPAEGEAFEEMIPKWRQLNVFE
GEMVQRGDVISDGAETPHDILRLRGVHAVTDYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKAVITNAYDSEFLEGEQVEVSRVKIANRKRAEEGKPLVEFERELLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHQNRAKKRNQPEQAG
AFEAPVAKANGFATDADIEAEFEFVADDATQSLAALLNAGDEE
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttagtaaagtttttaaaagcacaatcaaaatcgaatgatgattttgatgta
attaaaattggtttagcatcaccggataaaatccgttcttggtctttcggtgaagtaaaa
aaaccggaaacaattaactatcgtacctttaaacctgagcgtgacggtcttttctgtgca
cgtatcttcggaccggtaaaagattacgaatgtttatgcggtaaatataaacgtttaaaa
caccgcggcgtaatctgcgaaaaatgtggtgttgaagttactcaaactaaagtacgtcgt
gaccgtatgggtcatattgaacttgcttgtccggtggcacacatttggttcttaaaatca
cttccgtcccgtatcggtttaattttagatatgccgttacgcgatattgaacgtgtactt
tacttcgaatcttatgtggttaccgaaccaggaatgaccgatttagaaaaaaatcagtta
ttaaccgaagaacagttcttagacgcagaagagcgttggggcgatgagtttgaagcgaaa
atgggtgcggaaggtattcaagcacttttacgcgatatggacttagagcaccaatgtgaa
atgatgcgtgaagagttacaagaaacgaactctgaaacaaaacgtaagaaaatcacaaaa
cgcttaaaattattagaagcattccaacaatccggtaacaaaccggagtggatggtaatg
accgtattaccggtacttccgccggatcttcgtccgttagtaccacttgacggcggtcgt
tttgcgacttcggatctgaacgatttatatcgtcgtgtgatcaaccgtaacaaccgttta
aaacgcttattagatttagtagcgccggatatcattgtacgtaatgaaaaacgtatgtta
caagagtctgttgatgcattattagataacggtcgtcgtggtcgtgcgattacaggttct
aacaaacgtccgttaaaatctcttgcagatatgatcaagggtaaacaaggtcgtttccgt
cagaacttattaggtaaacgtgtggactattcaggtcgttcggtaatcaccgtaggtcct
tacttacacctacaccaatgcggtttaccgaaaaaaatggcattggaattattccgtccg
tttatttactctaaattagaatctcgcggcattgcttcaacaatcaaagctgcgaagaaa
atggttgaacgtgaagaaccgatcgtatgggatatccttgcggaagtgattcgtgaacac
ccaattttattaaaccgtgcgccgacacttcaccgtttaggtatccaagcgtttgagcca
atcttaatcgaaggtaaagcaatccagttacacccgcttgtttgtgcggcgttcaatgcg
gacttcgatggtgaccaaatggcggtacacgtaccattaacacttgaagctcagttagaa
gctcgtgcgttaatgatgtcaactaacaacgtactttcaccagcaagtggtgacccgatt
atcgtaccttctcaggacgttgtattaggtctttactacatgacgcgtgagaaagtaaat
gcgaaaggtgaaggaatgtatttccttgacccacgtgaagcggaaaaagcataccgtacc
ggtcaagctgaattacacgctcgcgtaaaagttcgtattaccgaacacgtgaaaaacgaa
gcgggcgaattagttgcggaaactaagttgttagatactactatcggtcgtgcaatctta
tggatgatcgcaccgaaaggtatgccgtttaaagtattcaaccaaacgttaggtaaaaaa
gcgatttcaaaattaatcaacgaatcgtaccgtcgtttaggtttaaaagaatcggtaatc
cttgccgaccaaattatgtataccggtttcgcgtacgctgctcgttcaggtgcgtcagtc
ggtatcgacgatatggtgattccggcacaaaaacacgaaattattcgtgcggcggaagca
gaagtggcagagattcaagaacaatttaactcaggtcttgtaactgcgggcgaacgttat
aacaaagtaatcgatatttgggcggctgcaaacgaacgtgttgcaaaagcaatgatggaa
aacctttcaacggaagaagtcatcaaccgtgaaggtaatccggaaaaacaagcgtcattc
aacagtatctttatgatggctgactcgggtgcgcgtggttctgcagctcagattcgtcag
ttagcgggtatgcgtggtcttatggctcgtccggacggctcgatcatcgaaacaccgatt
accgcgaacttccgtgaaggtctgaacgttcttcagtactttatttcaacccacggtgcg
cgtaaaggtcttgcggatactgcattaaagacagcgaactcaggttacttaacacgtcgt
ttagtagacgtagcacaagacttagtaatcactgaagatgactgtggtacgcacgaaggt
atcgtgatgacgccgttaatcgaaggtggtgatgttaaagaagcattacgtgatcgcgta
ttaggtcgtgtggtggcagaagacgtattaaaaccgggtacggaagaagtattaattcca
cgtaacaccttaatcgatgagaaatggtgtgatgtgattgatgcggaatctgtggacgta
atcaaagtacgttcggtggtaacttgtaacacagacttcggtgtgtgtgcgaaatgttac
ggtcgtgaccttgctcgcggtcaccttatcaaccaaggtgaagcagtgggtgttatcgca
gcgcaatcaatcggtgaaccgggtacacagctaaccatgcgtacgttccacatcggtggt
gcggcttctgcggcagcaaaagaatctagcatccaagtgaaaaacgcaggtacgattaaa
ttaactaacgctaaatttgtaaccaacaaagaaggcaaaatcgtattaacttcacgtaac
acagaattaactgttatcgacacattcggtcgtaccaaagaaaactataaagtaccttac
ggtgcagtgctttctaaaaacgacggtgcagaagttgcagtaggtgaagtcgttgcgaac
tgggatccgcatacaatgccggtcatctcagaggtaagcggtcgtatccaattcagcgac
atcgtagatggcttaaccgttactcgtcaaactgacgaattaaccggtttatcctctatc
gtggtgcaagatgtgggtgaacgtgcaacagcaggtaaagatttacgtccggcattacgt
ttagttgatgcacaaggtaacgatatcttaattccaagcacagacgttgcagcacaatac
ttcttaccgggtaaagcaatcgtaactttagacgacggtgcggaaatcgaagtcggtgaa
gcattagcacgtattccgcaagaatctgtgggtacgaaagatattaccggtggtcttcca
cgcgtagcagacttattcgaagcacgtaaaccgaaagagccggcaatccttgctgaaatt
tcaggtatcgtgtcattcggtaaagagactaaaggtaaacgtcgtttagtgatcacaccg
gcagaaggcgaagcattcgaagaaatgattccgaaatggcgtcagctcaacgtatttgaa
ggcgagatggtacaacgtggtgatgtaatctctgatggtgcggaaactccacacgacatc
ttacgtttacgtggcgttcacgctgtaacagattacatcgtaaacgaagtacaagaagtt
taccgcttacaaggggtaaaaattaacgataagcacatcgaagttatcgttcgccaaatg
ttacgtaaagcggttatcactaacgcatacgacagcgaattcctcgaaggggaacaagtt
gaagtttcacgtgtgaaaattgctaaccgtaaacgtgcagaagaaggcaaaccacttgtt
gagttcgaacgtgaattacttggtattaccaaagcgtcgcttgcaaccgagtcatttatc
tcagcagcgtcgttccaagaaaccacacgtgtgcttactgaagcggctgtggcaggtaaa
cgtgacgaattacgcggcttgaaagagaacgtaatcgtaggtcgtttaatcccggcaggt
acaggtttcgcatatcatcaaaaccgtgcgaaaaaacgtaaccagccagaacaagcgggc
gcttttgaagcaccggttgcaaaagctaacggattcgcaaccgatgctgatatcgaagcg
gaattcgaattcgttgcagacgatgcaactcaaagcctagcagcgttattaaatgcgggt
gatgaagagtaa
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integrated database retrieval system
