Isoalcanivorax pacificus: S7S_00680
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Entry
S7S_00680 CDS
T03580
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
apac
Isoalcanivorax pacificus
Brite
KEGG Orthology (KO) [BR:
apac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apac03021
]
S7S_00680
Transcription machinery [BR:
apac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
S7S_00680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
SWC7
Sp-DndD
GntR
Motif
Other DBs
NCBI-ProteinID:
AJD46560
UniProt:
A0A0B4XIN9
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All DBs
Position
146434..147303
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AA seq
289 aa
AA seq
DB search
MTTQLQKLEAQALQLNVPGASLDSYIQAVNAVPVLSAEAERELAERLFYEEDLDAARSLV
LSHLRFVVHIARSYTGYGLPLGDLIQEGNVGLMKAVRRFDPNVGVRLVSFAVHWIKAEIH
EFVLKNWRIVKVATTKSQRKLFFNLRGAKKRLGRLTLEESQRVADDLGVSLKDVQEMEGR
LAAFDASFDGPMDDDEDSTIVAPAQYLQADGGDPADILAESDWQQQSSRRLGAALQSLDD
RSRDILERRWLADDKTTLQDLANEYGVSAERIRQLENAAIGKLRNAMIA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacaactgcaaaagctggaagctcaggccctgcaactgaacgtgcccggcgcc
agcctggatagctacatccaggcggtgaacgccgtgccggtgctcagtgccgaggccgag
cgcgagctcgcggagcggttgttctacgaagaagacctggatgcagcgcgcagcctggtg
ctctcgcacctgcgtttcgtggtgcatattgcacgcagctacaccggctacggcctgccc
ttgggcgatctgatccaggaaggcaacgtcggcctgatgaaagccgtgcgccgctttgac
ccgaacgtgggcgtgcggctggtgagcttcgcggtgcactggatcaaggccgagattcac
gaattcgtgctgaaaaactggcgcatcgtgaaagtggccaccaccaagtcccagcgcaag
ctgttcttcaacctgcgcggcgccaaaaagcgcctgggccgcctgacgctggaagaatcc
cagcgcgtggccgacgacctgggtgtgagcctgaaggacgtgcaggaaatggaaggccgt
ctggccgcgttcgatgcctcctttgacggcccgatggacgatgacgaagacagcaccatc
gttgccccggcgcagtatctgcaagccgacggcggcgacccggccgacattttggccgag
agcgactggcagcagcagagcagccgtcgcctgggcgctgccctgcaaagcctggacgac
cgcagccgcgacattctcgaacgccgctggctggcggacgacaagaccacgctgcaggat
ctggccaatgaatatggcgtctccgccgagcgtatccggcaacttgaaaatgccgccatc
ggcaaattgcgcaacgccatgatcgcctga
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