Isoalcanivorax pacificus: S7S_02485
Help
Entry
S7S_02485 CDS
T03580
Name
(GenBank) penicillin-binding protein
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
apac
Isoalcanivorax pacificus
Pathway
apac00550
Peptidoglycan biosynthesis
apac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
apac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
S7S_02485
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
apac01003
]
S7S_02485
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
apac01011
]
S7S_02485
Enzymes [BR:
apac01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
S7S_02485
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
S7S_02485
Glycosyltransferases [BR:
apac01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
S7S_02485
Peptidoglycan biosynthesis and degradation proteins [BR:
apac01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
S7S_02485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AJD46919
UniProt:
A0A0B4XFV1
LinkDB
All DBs
Position
523715..526057
Genome browser
AA seq
780 aa
AA seq
DB search
MRLVMSVAKPPIEFIYTPRMPKKARRSFISKSLILKLAVVALVVMLAGLAWLDARVRSRF
DSHQWQLPARVYARPVELYAGRVLSQRHVDQLLSLLRYREQSGAPTPGSYSRSGGTYLIH
TRSFRDSDGGEPARQIRLRLADGRISALTRSDGARLPVARLEPMQIGSIHPGHSEDRILV
RLADTPPMLHDMLLATEDRQFYEHHGLSFRGLARAMVANLRSGGLSQGGSTLTQQLVKNF
WLTRDRTLSRKLLEMPMAVLLELHYEKPQIIETYLNEVYLGQDGSRAIHGMGLAAQFYFG
RPLEELEPHHFALLVGMLKGPSLYDPRRRPERALARRNVVLQVSHEQGLLTDSEYQAYSA
RPLEVVPRGGAALYAFPAFVDLVRRQLARDYPPAVLSSEGLHIHATLDVLAQLAAEDALA
RVLEQRDPKAANKLNGAVVITAPDQGDVLAVVGDRVPRSTGFNRALDAVRPIGSLAKPAV
LLTALEQPKRYSLATLVEDEPIEVPLAHGDVWAPQNFDKQSRGPIPLVQALAQSRNQAMA
KLGMDVGLQPLILTLKRLGVQGNIPAYPSIILGSHPLSPFEVAVMYQPLATGGFRTPLRS
ITDVLDLAGEPLARYPVSADPVIDQGPAFLTQWAMIQVMRAGTGQSMLGVLPPDIVVAGK
TGTSDGYRDAWFAGFSGNHLAVVWVGRDDNQPAGVAGSSAALPVWGALMAALPQRSLRED
VPPGVEWVWMDADGQRRSAEGCDGALRYPMLTTSIPEAASDCGEDVSQGGIKGWFRRIFD
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgcggttggtgatgtctgttgccaaaccgcccattgaattcatctatactccgcgcatg
ccaaaaaaagcccgccgttcgttcatttccaagagcctgatcctgaagctggccgtggtc
gcgctggtcgtgatgctggccggcctcgcctggctggatgcccgtgtacgcagccgcttc
gacagccatcagtggcagttgccggcgcgagtgtatgcgcgtccggtggagctgtatgcc
ggacgggtgctcagccagcgtcatgtggaccagctgctgtccctgctgcgctaccgtgag
caatccggtgccccgacgccgggttcctattcccgcagtggcggcacctatctgatccac
acccgcagcttccgtgacagcgacggcggcgagccggcgcggcagatccgcctgcggctg
gccgatggccggatcagcgccctcacccgcagtgacggcgcccggttgccggtggcgcgg
ctggagccgatgcagatcggcagcatccatccgggccacagtgaagaccgcattctggtg
cggctggccgacacgccgccgatgctgcacgacatgctgctggcgaccgaggaccggcag
ttctacgaacaccacggcctgtcgttccgtggcctggcccgcgccatggtggccaatctg
cgctccggcggcctgagccagggcggcagcaccctgacccagcaactggtgaagaatttc
tggctcacccgcgaccgcacgctgtcgcgcaagctgctggaaatgccgatggccgtgctg
ctggagctgcattacgaaaaaccgcagatcatcgagacctacctgaacgaggtctacctg
ggccaggacggctcgcgcgccatccatggcatggggctggcggcccagttctattttggc
cggcccctggaagagctggagcctcaccacttcgccctgctggtgggcatgctcaagggc
ccgagcctgtatgacccgcgccgccgcccggagcgggcgctggcgcggcgcaatgtcgtg
ttgcaggtgtcgcacgaacagggcctgctcaccgacagcgaataccaagcctacagtgcc
cgcccgctggaagtggtgccccgtggcggcgctgcgctgtatgccttcccggccttcgtc
gacctggtgcgccgtcagttggcccgggattacccgccggccgtgctctccagcgagggg
ctgcacattcatgccacgctggatgtcctggcgcagctggcggcggaagacgcgctggca
cgggtattggaacagcgtgatccgaaggcggccaacaagctgaacggcgcggtggtgatc
accgcgccggaccagggcgacgtgctggcggtagtcggcgaccgcgtaccgcgcagcacc
ggcttcaaccgggcgttggatgcagtgcggccgatcggctcgctggccaagccggcggtg
ctgctgaccgcgctggaacagccgaaacgctactcgctggcgacgctggtggaggacgag
ccgatcgaggtgccactcgcccatggcgatgtctgggcaccgcagaactttgacaagcaa
tcccgtgggcccattccactggtgcaggccctggcgcagtcgcgcaatcaggcgatggcg
aaactgggcatggacgtggggctgcaaccgctgatcctgacgctcaagcgcctcggcgtg
cagggcaatatcccggcctacccgagcatcatcctcggcagccatccgttgtcaccgttt
gaagtggcggtgatgtaccagccgctggcgacgggtgggttccgtacgccactgcgcagc
atcaccgacgtgctcgatcttgccggcgagcccctggcccgctacccggtgtctgccgac
ccggtgatcgaccagggcccggccttcctgacccagtgggccatgatccaggtgatgcgt
gccggcaccggacagagcatgctcggcgtgctgccgccggatatcgtggtggccggcaag
accggcaccagcgacggttaccgtgatgcctggtttgccggcttcagcggcaatcacctg
gcagtggtctgggtggggcgcgacgataatcagccggccggtgtggccggcagcagcgcc
gcactgccggtctggggcgcgctgatggcggccctgccacagcgcagcctgcgcgaggat
gtgccgccgggtgtggaatgggtctggatggatgccgacgggcagcgtcgcagtgccgaa
ggttgcgacggcgccctgcgatacccgatgctgaccacctcgatccccgaggccgccagc
gattgcggcgaagacgtttcacagggaggtatcaaaggatggttccgtcgtatcttcgat
tga
DBGET
integrated database retrieval system
