| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
apac Isoalcanivorax pacificus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:apac00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
S7S_02810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:apac03021]
S7S_02810
03400 DNA repair and recombination proteins [BR:apac03400]
S7S_02810
Enzymes [BR:apac01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
S7S_02810
Transcription machinery [BR:apac03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
S7S_02810
DNA repair and recombination proteins [BR:apac03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
S7S_02810
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
606283..610485
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| AA seq |
1400 aa
MKDLLNLLKSQGQVTEFDKLKIGLAPPDLIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSL
PSRIGLMLDMTLRDIERVLYFESFVVVEPGMTSLEKGQLLSDEEYFEALEQFGDEFDARM
GAEAVQHLLADLDLEQDIADLRQDIESTGSDTKLKKLSKRLKLMEAFQASGNRPEWMIMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHECGLPKKMALELFKPFIFAKLEGRGLATTIKAAKKMVERETAEVWDILAEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPASGEPIIVPTQDVVLGLYYITRDRVNAQGEGMFFADTREVSRALGNK
AIHLHARIKVRIEESVRDKDGNVTERTYIADTTAGRCKLWEIVPTGMAFEAVNQPMTKKA
VSRLLNQCYRILGTKQTCIFADQLMYLGFREATYSGSSVGIEDMVIPDEKVSILASAEDE
VREIEEQFASGLVTRGERYNKVVDIWSRTNDQIAKAMMDNLKSETVINRDGKEEQQGSFN
SIWMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITSNFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEPDCGTEEGVLMTPLIEGGDVVEPLRERVL
GRVAARDVIKPGTDEVLAPAGTLLDENWVDVLEVSGVDEVLVRSPISCATRYGVCAQCYG
RDLARGHRINIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRASAVSSIQIKHGGSVRL
HNIKTVSHKDGLVAVSRSGELAVADEIGRERERYKVPYGALITAKEGDVVEGGQVVATWD
PHTHPIIAEVEGRVQFGDMEEGITVNYQTDELTGLTTIEMIDAKDRPAAGKDMRPVIRVL
DAKGKPITMPNSETPAQYFLPAGSLTGLKDGAEIKTGDVIARIPQESSKTRDITGGLPRV
ADLFEARQPKEAAILAEKSGVVSFGKETKGKVRLVITPDDGGDVHEELIPKWRQLNVFEG
EHVAKGEVISDGPLNPHDILRLLGQTELARYIVNEVQEVYRLQGVKINDKHIEVIIRQML
RKVEITEVGESAFIKGEQVELARVLTEIDRLKAADKMLPRFDRMLLGITKASLATESFIS
AASFQETTRVLTEAAVTGKEDGLRGLKENVVVGRLIPAGTGYAYHMERRRQRDLARGPEA
PTMDEVEQALSEALSFSDEG |
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| NT seq |
4203 nt +upstreamnt +downstreamnt
ttgaaagacttgctgaatcttctgaaaagtcagggacaagtcactgagtttgacaaactc
aagatcggtctggcaccgccagacctgatccgttcttggtcctttggtgaggtcaagaag
ccggagaccatcaactaccgtaccttcaagccggaacgggatggtctgttctgcgcgcgc
atctttggtccgatcaaggactacgagtgcctgtgcggcaaatacaagcgcctcaagcac
cgtggcgtcatctgtgagaagtgtggcgttgaagtcacgctctccaaagtgcgccgtgag
cgcatgggccacatcgagctggccagcccggtcgcgcacatctggttcctgaagtcgctg
ccgtcccgtatcggcctgatgctggacatgacactgcgtgatatcgagcgcgtgctgtac
ttcgaatcgttcgtggtggtcgagccgggcatgaccagcctggagaaaggccagctgctg
tccgacgaagagtacttcgaggcactggaacagttcggtgacgagttcgatgcccgcatg
ggtgccgaagctgtacagcacctgctggcggacctggatctggagcaggacatcgctgac
ctgcgccaggacatcgagtccaccggttccgacaccaagctgaagaagctgtccaagcgc
ctcaagctgatggaagccttccaggcctccggcaaccgtccggagtggatgatcatgacg
gtgctgcccgtgctgccgccggacctgcgtccgctggtaccgctggacggcggccgcttc
gcgacctcggatctgaacgatctgtatcgccgcgtgatcaaccgtaacaaccgtctcaag
cgcctgctggacctggcggcgccggacatcatcgtgcgcaacgaaaagcgcatgctgcag
gagtccgtggacgcgctgctggacaacggccgtcgtggccgtgccattaccggctctaac
aagcgcccgctgaagtccctggccgacatgatcaagggcaagcagggccgtttccgtcag
aacctgctcggcaagcgcgtggattactccggtcgttccgtgatcgtggtaggcccgacg
ctgaaactgcacgagtgcggtctgccgaagaaaatggcgctggaactgttcaagccgttc
atcttcgccaagctggaaggacgaggacttgccaccaccatcaaggcggccaagaagatg
gtcgagcgcgaaaccgccgaggtctgggatatcctggccgaagtgattcgcgagcacccg
gtgctgctgaaccgtgcgccgacgctgcaccgtctgggtatccaggcgttcgagccggtg
ctgatcgaaggcaaggcaatccagttgcacccgctggtgtgtgcggccttcaacgccgac
ttcgacggtgaccagatggcggtacacgtaccgctgaccctggaagcccagctcgaagcc
cgtgcgctgatgatgtccacaaacaacatcctgtcgccggcgagcggtgagccgatcatc
gtgccgacccaggacgtggtactgggcctgtactacatcacccgtgaccgggtgaatgca
cagggcgaaggcatgttctttgcggacacccgcgaagtcagccgcgcgctgggcaacaag
gcgattcacctgcacgcccgcatcaaggtgcgtatcgaggaaagcgtgcgcgacaaggac
ggcaacgtcactgagcgtacctatattgccgataccactgccggccgctgcaaactgtgg
gaaatcgtgccgacgggcatggcgttcgaagccgtgaaccagccgatgaccaagaaggca
gtgtcgcgcctgctgaaccagtgctaccgcatcctgggcaccaagcagacctgtatcttc
gctgaccagctgatgtaccttggcttccgcgaggcgacctattccggttcgtccgtcggt
atcgaggacatggtgatcccggacgagaaagtctcgatcctggcgtccgccgaagacgag
gtgcgcgagatcgaagagcagttcgcttccggtctggtgacgcgtggcgagcgctacaac
aaggtcgtggatatctggtcgcgcaccaacgaccagatcgccaaggcgatgatggacaac
ctcaagagcgagaccgtcatcaaccgtgacggcaaggaagagcagcaaggctccttcaac
tcgatctggatgatggccgattccggcgcgcggggttccgctgcacagattcgccagctc
gccggtatgcgcggcctgatggcgaagccggatggttccattatcgaaacgccgatcacc
tcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacccacggtgcccgt
aaaggtctggccgataccgcgctgaaaaccgcgaactccggttacctgacccgtcgtctc
gtggacgtggcccaggatctggtcgtcaccgaaccggattgcggtaccgaggaaggtgta
ctgatgacaccgctgatcgaaggcggtgatgtggtggaaccgctgcgcgagcgtgtgctc
ggacgtgtggccgcccgtgacgtgatcaagccgggtaccgatgaggtgctggctccggcc
ggtacactgctggacgaaaactgggtggacgtgctggaagtcagcggtgtcgacgaagtg
ctggtgcgctcgccgatcagctgtgctacccgctacggcgtgtgcgcccagtgctacggc
cgtgacctggcccgtggccaccgcatcaacatcggcgaggccgtgggtgttatcgcggcc
cagtccatcggtgagccgggtacccagctgaccatgcggaccttccacatcggtggggcg
gcgagccgggcgtctgcggtgtccagcatccagatcaagcatggcggcagcgtacgtctg
cacaacatcaagaccgtgtcgcataaagatggcctggtggcggtatcccgctccggtgaa
ctggccgtggccgatgagatcggccgcgagcgcgagcgctataaagtgccctacggtgca
ctgattaccgccaaagaaggtgatgtggtggagggcggtcaggtcgtcgcgacctgggat
ccgcatacccacccgatcatcgccgaggtggaaggtcgcgtgcagttcggtgatatggaa
gaaggcatcaccgtcaactaccagaccgacgaactgaccggtctgaccaccatcgagatg
atcgatgccaaggaccgtccggccgccggcaaggacatgcgtccggtgatccgggtgctg
gatgccaagggcaagccgatcaccatgccgaactccgagaccccggcgcagtacttcctg
ccggccggctcgctgaccggcctgaaagatggcgccgagatcaagactggtgacgtgatt
gcgcggattccgcaggaatcctccaagacccgtgacatcaccggtggtctgccgcgtgtg
gccgacctgttcgaagcccgtcagccgaaagaagcggcgatcctggccgagaagagcggt
gtggtgtcgttcggtaaagagaccaaaggcaaggtgcgcctggtcatcaccccggatgac
ggtggtgacgtccatgaagagctgattccgaagtggcgccagctgaacgtgttcgaaggt
gagcacgtggccaagggcgaggtgatctccgacggcccgctgaacccgcacgatatcctg
cgcctgctgggccagaccgagttggcccgctacatcgtcaacgaggtgcaggaggtttac
cgcctgcagggtgtgaagatcaacgacaagcacatcgaagtgatcatccgccagatgctg
cgcaaggtggaaatcaccgaagtgggcgagtcggccttcatcaagggcgagcaggtggaa
ctggcgcgcgtgctgaccgaaatcgaccgcctcaaggcggccgacaagatgctgccgcgt
ttcgaccgcatgctgctgggtatcaccaaggcgtcgctggccaccgagtcgttcatctcc
gcggcctccttccaggagaccacccgggtactgaccgaagcagcggtcaccggcaaggaa
gatggcctgcgcggcctgaaagagaacgtggtcgtgggtcgtctgatcccggccggtacg
ggctatgcctatcacatggagcgccggcgtcagcgcgatctggcccgtgggccggaagca
ccgaccatggacgaagtggaacaggcgctgtccgaggcgctcagcttctccgacgagggc
tga |
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