Isoalcanivorax pacificus: S7S_10400
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Entry
S7S_10400 CDS
T03580
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
apac
Isoalcanivorax pacificus
Pathway
apac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
S7S_10400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apac03400
]
S7S_10400
DNA repair and recombination proteins [BR:
apac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
S7S_10400
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
S7S_10400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AJD48492
UniProt:
A0A0B4XQI9
LinkDB
All DBs
Position
complement(2310285..2312360)
Genome browser
AA seq
691 aa
AA seq
DB search
MASASSRDSSGTTSGPSGKDEGFRIHAGYAPAGDQPAAIAGLVEGIEDGLSHQTLLGVTG
SGKTFTIANVIQAVQRPTIVMAPNKTLAAQLYSEFREFFPENSVEYFVSYYDYYQPEAYV
PSSDTFIEKDSAINEHIEQMRLSATKALMERRDTIIVASVSAIYGLGDPNSYMSMLLHVV
RGDRIDQRAVLRRLAELQYTRNEMDFRRATYRVRGDVIDIFPADEDREAVRLELFDDEVE
NISIFDPLTGEILRKVSRISIYPKSHYVTPREVVLEAIEKIKDELRERLEQLRNANKLVE
AQRLEQRTRFDIEMLQELGYCNGVENYSRLFSGRAPGEAPPTLFDYLPDDALLVMDESHV
TVPQIGGMYKGDRSRKETLVEYGFRLPSALDNRPLKFEEWEGLAPQTIFVSATPGPYEQK
HAGQVVEQVVRPTGLVDPVIEVRPALSQVDDVLGEIREAVQRDERVLITVLTKRMAEDLT
EFLQEHDVRVRYLHSDVDTVERVELIRDLRLGKFDVLVGINLLREGLDMPEVALVAIFDA
DKEGFLRSDRSLIQTIGRAARNLKGRAIMYADKITGSMQRAIEETDRRREKQIAFNTEHG
ITPTALNKRIRDILEDTYSTGVGGKHGKSRKKGVGEDSGEYAVPASPAEATREIAALEAK
MLEHARNLEFEQAARLRDQIQKIRENSFLAG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagcttcttcacgcgactcatctggcaccacctctggcccctccggcaaggac
gaaggcttccgtatccatgccggttatgcgcccgctggcgaccagcctgcggccatcgcc
gggctggtcgaaggcattgaggatggcctgtcgcaccagaccctgctcggcgtaaccggc
tcgggcaagaccttcaccatcgccaacgtcatccaggcggtacagcggccgaccatcgtc
atggcgccgaacaagaccctggcggcgcagctgtacagcgaattccgcgagttcttcccg
gaaaactcggtggaatacttcgtctcctactacgactactaccagccggaagcctacgtg
ccgtcgtcggacaccttcatcgaaaaggattccgccatcaatgagcacatcgagcagatg
cggctgtcagccaccaaggcgctgatggaacgccgcgacaccatcatcgtggcctcggtg
tccgcgatctacggcctgggtgatccgaacagctatatgtcgatgctgctgcacgtggtg
cgcggcgaccggattgaccagcgcgccgtgctgcgccgcctggcggagctgcagtatacc
cgcaacgagatggacttccgtcgcgctacttaccgggtgcgtggcgatgtgatcgatatt
ttcccggctgatgaagaccgtgaagcggtgcgcctggagctgttcgatgacgaagtcgag
aacatcagcatcttcgacccgctgaccggcgagatcctgcgcaaggtgtcgcgcatttcc
atctatcccaagagccactatgtgaccccccgcgaagtcgtgctggaggcgatcgagaag
atcaaggacgaactgcgcgagcgcctggagcagttgcgcaacgccaacaagctggtcgaa
gcgcagcggctggaacagcgcacccgcttcgatatcgagatgctgcaggagctgggctat
tgcaacggcgtggaaaactactcgcgcctgttctccggccgcgcaccgggcgaagcgccg
ccgaccctgttcgactacctgccggacgacgcgctgctggtgatggacgaatcccacgtg
accgtgccgcagatcggcggcatgtacaaaggcgaccgctcgcgcaaggaaacactggtt
gaatacggcttccgcctgccctcggcgctggataaccggcctctgaaattcgaggaatgg
gaagggctggcgccgcagaccatcttcgtctccgcgacgcccggcccgtatgaacagaag
cacgccggccaggtggtggaacaggtggtgcgccccaccgggctggtggacccggtcatc
gaagtgcggccggcgctcagccaggtggacgatgtgctcggcgaaattcgcgaagcggta
cagcgcgacgagcgggtgttgatcacggtattgaccaaacgcatggcggaagacctgacc
gagttcctgcaggagcatgacgtgcgtgtgcgctatctgcactcggacgtggataccgtc
gaacgggtagagctgatccgcgacctgcggctgggcaagttcgacgtgctggtgggcatc
aacctgctgcgcgaaggcctggacatgccggaggtggcgctggtggccatcttcgatgcc
gacaaggaaggcttcctgcgttccgaccgctcgctgatccagaccatcggccgcgcggca
cggaacctcaagggccgcgccatcatgtacgccgacaagatcaccggctccatgcagcgc
gctatcgaagagacggatcgccggcgcgaaaaacagatcgccttcaacaccgagcacggc
atcacgccgacggccctgaacaagcgcatccgcgacattctggaagacacctattccacg
ggcgtgggcggcaagcacggcaagagccgcaaaaaaggcgtgggcgaggacagcggcgag
tatgccgtgccggcgtcgccagcagaggccacccgcgagatcgcggcgctggaagcaaaa
atgctcgagcatgcccgcaacctggagttcgagcaggcagcccgcctgcgcgaccagata
cagaaaatccgcgagaacagctttctcgccggctga
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integrated database retrieval system
