KEGG   Isoalcanivorax pacificus: S7S_10825
Entry
S7S_10825         CDS       T03580                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
apac  Isoalcanivorax pacificus
Brite
KEGG Orthology (KO) [BR:apac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:apac03016]
    S7S_10825
Enzymes [BR:apac01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     S7S_10825
Transfer RNA biogenesis [BR:apac03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    S7S_10825
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C DNA_pol_A_exoN
Other DBs
NCBI-ProteinID: AJD48577
UniProt: A0A0B4XQR6
LinkDB
Position
complement(2406145..2407230)
AA seq 361 aa
MTYRWIDRVDDLQDAMAGLSAQQPLYLDTEFMRERTFWPQLALVQVNTGDAIWLIDAPAL
ADPTTLAPLCAGHPLVMHACSEDIEALNVFTGAAPVAIEDTQIAAALCGHDLQCSYQRLV
RELTGTELPKDATRTDWLKRPLSPQQLAYARDDVVWLPELAERLREQLAGLGRLVWWQEE
CQRLLDSVQAQVPAEDAWRQVKGAGHLQGVALARLQQLAAWRDRMARERDLPRGFIIRDP
ALLALAQQPPRQAEGLHDQGVHPSVIRRDGETLLVLLREAEQMTPPAPLPEPPDAAQRDR
VKQLRTHVGKIAAQLGVEPEVLVRRRWLEALVREPEQIPAPMQGWRRTLVAEPLQEILLN
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgacttatcgctggattgaccgggtcgacgacctgcaggacgccatggccggcctgtcg
gcacagcagccgctgtatctggataccgaattcatgcgcgagcgcacgttctggccgcag
cttgcgctggtgcaggtgaacaccggggacgccatctggctgatcgacgcgccggcactg
gcggacccgaccacgttggcccccctgtgcgccgggcatccgctggtgatgcacgcctgc
tcggaagatatcgaagcgctgaacgtctttaccggcgcggcacccgtggcgatcgaggac
acccagattgctgcggcactgtgtggccatgacctgcaatgcagttaccagcggctggtg
cgtgaactgaccggcaccgaactgcccaaagacgccacccgcaccgactggctgaaacgc
cccctttccccgcaacagcttgcttatgcccgcgatgacgtggtgtggctgccggagttg
gccgaacgcctgcgcgaacagcttgcgggccttggccggctggtgtggtggcaggaagag
tgccagcgcttgctggacagcgtgcaggcccaggtgccggcggaagatgcctggcggcag
gtgaagggcgccgggcatctgcagggcgtggcgttggcccggctgcagcaactggccgcc
tggcgtgaccgcatggcccgcgagcgtgatctgccgcggggctttatcattcgcgatccg
gccctgctggcgctggcacaacagccaccgcgtcaggctgagggcctgcatgaccagggc
gtgcatccgtcggtgatccgccgtgacggcgaaacgctgctggtgctgctgcgtgaggct
gaacagatgacaccgccggcgccactgccggaaccaccggacgcggcgcagcgcgaccgg
gtcaagcaattgcgcacacacgtcggcaagattgccgcgcagctcggggtggagccggag
gtgctggtacgccgccgctggctggaagcgctggtgcgcgaacctgagcagataccggca
ccgatgcagggctggcggcgcacgctggtggccgagccgctgcaggagatattgctgaat
gactga

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