Isoalcanivorax pacificus: S7S_12390
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Entry
S7S_12390 CDS
T03580
Name
(GenBank) DNA repair protein recO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
apac
Isoalcanivorax pacificus
Pathway
apac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
S7S_12390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apac03400
]
S7S_12390
DNA repair and recombination proteins [BR:
apac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
S7S_12390
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
S7S_12390
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AJD48890
UniProt:
A0A0B4XQ60
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Position
complement(2817312..2817980)
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AA seq
222 aa
AA seq
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MADRGSPLETAWVLHARPYRNSSLVLDMFSAGRGRLGVVARGGRRNHLLQPFRPLLVSFT
GRGELLTIQQVESAGSTLPLAGRALYCGMYLNELLVRLLHRNDPHPGLMAPYEATLQALA
TDVPAQDVLLRHFELALLDELGYSFSLTEDATGMPLRPQQAYRFDPELGLVPAASGWPGN
ALLAMAAGDWQDDTRRVARDLLRAALAPHLGSRPLVSRELFR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggggctcgccgctggaaaccgcctgggtgctgcatgcccggccctatcgc
aacagcagcctggtgctggacatgttcagtgccggccggggccggcttggcgtggtggcg
cgcggcggccgccgcaaccatcttttgcagccttttcgcccgttgctggtgagtttcacc
gggcgcggtgaactgctgactatccagcaggtggaaagtgccggcagtaccttgccgctg
gctggccgtgcgctgtactgcggcatgtacctgaacgaattgctggtgcggctgctgcat
cgcaacgacccccatcccggcctgatggcgccctacgaggcgaccctccaggccctggcc
acggacgtgccggcgcaggatgtcctgctgcggcacttcgaactcgccctgctggatgaa
ctcggctacagcttttcgctcaccgaggatgccaccggcatgcccctgcgcccgcagcag
gcttatcgttttgatcccgaactgggcctggtgcccgctgccagcggctggcccggcaac
gccttgctcgccatggccgccggtgactggcaggacgacacccgccgcgtggcccgcgac
ctgctgcgcgccgcgctggcgccgcatctgggcagccggccgctggtgagccgggagctg
tttcggtag
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