Isoalcanivorax pacificus: S7S_12525
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Entry
S7S_12525 CDS
T03580
Symbol
lysS
Name
(GenBank) lysyl-tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
apac
Isoalcanivorax pacificus
Pathway
apac00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
apac00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
S7S_12525 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
apac01007
]
S7S_12525 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apac03016
]
S7S_12525 (lysS)
Enzymes [BR:
apac01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
S7S_12525 (lysS)
Amino acid related enzymes [BR:
apac01007
]
Aminoacyl-tRNA synthetase
Class II (A)
S7S_12525 (lysS)
Transfer RNA biogenesis [BR:
apac03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
S7S_12525 (lysS)
Prokaryotic type
Other AARSs
S7S_12525 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
RMI2
Motif
Other DBs
NCBI-ProteinID:
AJD48917
UniProt:
A0A0B4XRP1
LinkDB
All DBs
Position
complement(2843344..2844831)
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AA seq
495 aa
AA seq
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MTDDQLQQDENRLIAERRDKLRQLREAGQAFPNQYRPDSLAADLIAQYGEEEKDALEARN
IVVAIAGRLMLDRKSFKVLQDQSGRIQIYATKDVQQATKHWDIGDIVGVRGKLCKSGKGD
LYVMMDEYVLLTKSLRPLPEKHKGLTDTEMRYRQRYVDLMTNEDTRRTFRIRARVVSGIR
RYLEQRGFYEAETPMLQVIPGGATARPFVTHHNSLDLDMYLRIAPELYLKRLVVGGFDRV
FEINRNFRNEGLSTRHNPEFTMVEFYQAYADYNDLMDLTEDMLRTIALDVLGSTDVPYQG
EMFDFGQPFARMTVFDSILHFNPDIRAEQLRDEQGARAIATGLGIPLKDSYGLGKVQIEI
FEKTVEHRLMQPTFITEYPTEVSPLARRSDANPFVTDRFEFFVGGREIANGFSELNDAED
QAERFRSQAAEKDAGDLEAMFFDDDYVTALEYGMPPTAGEGIGIDRLVMLFTDTPSIRDV
ILFPHMRPLAKPGGA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgaccagctccagcaggacgaaaaccgtctgatcgccgagcgccgcgacaaa
ttgcggcagctgcgtgaggcaggccaggcattcccgaaccagtaccgcccggacagcctg
gccgcagacctgatcgcgcaatacggcgaggaagaaaaggacgcgctggaagcccgcaac
atcgttgtcgccatcgccggccggctgatgctggatcgcaagtcgttcaaggtgttgcag
gaccagagcggccgtatccagatttatgccaccaaggacgtgcagcaggcgacgaaacac
tgggatatcggcgacatcgtcggtgtgcgtggcaagctgtgcaaatccggcaagggtgat
ctgtatgtgatgatggacgagtatgtcctgctgaccaaatccctgcgtccgctgccggaa
aaacacaagggcctgaccgacactgaaatgcgctaccgccagcgttacgtcgacctgatg
accaatgaagacacccgccgcacattccgtatccgggcgcgggtggtcagtggcattcgc
cggtacctggagcagcgtggcttctatgaggcggaaacgccgatgctgcaggtgattccc
ggcggcgccacggcgcggccgttcgtcacccaccacaatagcctggacctggacatgtat
ctgcgcattgcgccggagctgtacctgaaacggctggtggtgggcggcttcgaccgcgtg
ttcgagatcaaccgcaatttccgcaatgaagggctctccacccggcacaacccggaattc
accatggtggagttctaccaggcctacgccgactacaacgacctgatggacctgaccgaa
gacatgctgcgcaccatcgcgctggatgtgctcggcagcacggacgtgccgtaccagggc
gagatgttcgatttcggccagccgtttgcgcgcatgacggtgttcgattcgatcctgcac
ttcaatccggacatacgcgccgaacagctgcgcgacgagcagggcgcgcgcgccatcgcc
accggtctgggtattccgctgaaggacagctacgggctgggcaaggtgcagatcgaaatt
ttcgagaaaacggtagaacatcgattaatgcagccgaccttcatcaccgaatacccgacc
gaagtgtcgccgctggcacgtcgcagcgacgccaacccgttcgtcaccgaccggtttgag
ttttttgtcggtggccgggaaatcgccaacggcttctccgagctgaacgatgccgaagac
caggccgaacgcttccgtagccaggctgccgagaaggacgccggcgacctggaggccatg
ttttttgacgacgattatgtgacggcgctggagtacggtatgccgcccaccgcaggtgag
gggatcggcatagacaggctggtaatgctttttaccgatacgccatccatccgtgatgtg
attctctttccccatatgcgtccgctggcaaaaccaggcggcgcttaa
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