Isoalcanivorax pacificus: S7S_13035
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Entry
S7S_13035 CDS
T03580
Name
(GenBank) outer membrane protein OprF
KO
K03286
OmpA-OmpF porin, OOP family
Organism
apac
Isoalcanivorax pacificus
Brite
KEGG Orthology (KO) [BR:
apac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
apac02000
]
S7S_13035
Transporters [BR:
apac02000
]
Other transporters
Pores ion channels [TC:
1
]
S7S_13035
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
OMP_b-brl
DUF748
Motif
Other DBs
NCBI-ProteinID:
AJD49019
UniProt:
A0A0B4XL92
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All DBs
Position
2958782..2959945
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AA seq
387 aa
AA seq
DB search
MKATTRKYVSLLGLAGASLIGVSAQAHDIPEKYIYLGGHVSQYWFDKDELGPNGYDTVTL
PGLQAGARFAPNWSAQLWWERNAVRTEITNDKSYANLALGSLRYHFHDTSWGPFEPYAGV
TAGQLRFDRRGDEKDEETVAGAEFGMQARLAEHWIFDIGARPLWTEWRDRFEGEVYAGLN
LVFGATRKAEPAPEPVVPAVYDQDNDGVPDERDNCPNTPAGVAVDASGCPLDTDGDGVPD
YQDQCPNTPAGALVDEQGCQKYLESDVRETLYVEFELNKAEIRQEYIGELAQLAEMMKQY
PSARLLLEGHTDSSGAASYNMRLSGERAASVKNSLVNSFGINPDRIDTVGRGEEQPIADN
TTAEGRAQNRRVEAILRATKREALYEE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccacgactcgcaaatacgtttccctgctgggcctcgccggcgcctcgctgatc
ggcgtttccgcccaggcacacgatattccggaaaaatacatttacctcggtggccacgtc
agccagtactggttcgataaggacgaactcggcccgaacggctatgacaccgtgacactg
cccggcctgcaggccggcgcgcgcttcgcaccaaactggtctgcccagctctggtgggaa
cgcaatgcagtgcgcaccgagatcaccaatgacaagagctatgccaacctggcgctgggt
tccctgcgctatcacttccatgacacgtcctgggggccgttcgaaccctacgcgggcgtg
acagccggtcagctgcgttttgatcgtcgtggcgatgaaaaggacgaggaaaccgtggca
ggcgccgaattcggcatgcaggcacggctggctgagcactggattttcgacatcggcgcg
cgcccgctgtggaccgaatggcgcgaccgcttcgaaggtgaagtctatgctggcctgaac
ctggtgttcggcgccacccgcaaggctgaaccggcaccggagccagtcgtcccggcggtg
tatgaccaggacaatgacggcgtgccggatgagcgcgacaactgcccgaacaccccggcc
ggtgttgccgtggacgccagcggctgcccgctggacaccgacggtgacggcgtaccggac
tatcaggatcagtgccccaacaccccggccggcgcgctggtggatgagcagggctgccag
aagtacctggaaagcgatgtgcgtgaaacactgtacgtggagttcgagctgaacaaggcc
gagattcgccaggagtacatcggtgaactggcacaactggccgagatgatgaagcagtac
ccgtccgcgcgcctgctgctggaaggccacaccgacagctccggtgcggcctcctacaac
atgcgtctctcgggtgaacgtgccgcgtcagtgaagaactcgctggtgaacagcttcggc
atcaacccggaccgcatcgataccgtgggccggggtgaagaacagccgatcgcggacaac
accaccgccgaaggccgtgcccagaaccgccgcgtcgaggcgatcctgcgcgcgaccaag
cgtgaagccctgtacgaagagtaa
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