KEGG   Isoalcanivorax pacificus: S7S_16495
Entry
S7S_16495         CDS       T03580                                 
Name
(GenBank) transcription elongation factor
  KO
K02600  transcription termination/antitermination protein NusA
Organism
apac  Isoalcanivorax pacificus
Brite
KEGG Orthology (KO) [BR:apac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apac03021]
    S7S_16495
   03009 Ribosome biogenesis [BR:apac03009]
    S7S_16495
Transcription machinery [BR:apac03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     S7S_16495
Ribosome biogenesis [BR:apac03009]
 Prokaryotic type
  rRNA transcription factors
   S7S_16495
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 S1 KH_NusA_C KH_2 DUF4332
Other DBs
NCBI-ProteinID: AJD49711
UniProt: A0A0B4XR88
LinkDB
Position
complement(3700421..3701920)
AA seq 499 aa
MNKEILLVAETVSNEKGVSRDVIFEAIELALAAATKKRFKEDDVEVRVHIDRVSGDYRTY
RVWHVVPDEDLYEFGRQLTLDEAREQDPSLNIGDTWAEEVESVAFGRIAAQTAKQVIVQK
VREAERAQIIEEYRDRIGELISGTVKKATRDSIILDLGGNAEALITRDQMIPREAVRQND
RIRAYLAGVNPENRGPQLFASRAAPEMLIELFKIEVPEIGEELIEIKGAARDPGSRAKIA
VKTNDQRIDPVGACVGMRGARVQAVSNELAGERIDIVLWDDNPAQLVINAMQPAEVASIV
VDEERHAMDIAVEDESALAQAIGRGGQNIRLASELTGWELNVMTLDAAQEKQQAETQEIL
ERFIADLDVDEDIAAVLVEEGFSTLEEVAYVPMEEMLAIDGFDEDIVEALRQRAKDALLT
RALTSEEQLEHAAPAEDLLNMEGMDRALAVKLASMGVITMEDLAEQAVDDLLDIEGLDEE
RAAQLIMTARAPWFADEAE
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgaacaaagagatcctgctggttgcggaaaccgtatccaatgaaaagggcgtcagccgt
gacgtcatttttgaagcgattgagctggcgctggccgccgcgaccaaaaagcgcttcaag
gaagacgacgtggaagtgcgcgtgcacatcgaccgcgtgtccggtgactaccgcacctac
cgcgtatggcacgtggtgccggacgaagacctgtacgagttcggccgccagctgaccctg
gacgaagcccgcgagcaggacccgtcgctgaacatcggcgacacctgggccgaggaagtc
gagtcggtggcgtttggccgtatcgccgcgcagaccgccaagcaggtgatcgtgcagaaa
gtgcgcgaagccgagcgcgcccagatcatcgaagaataccgtgatcgtatcggcgagctg
atcagcggcaccgtcaagaaagcgacacgcgacagcatcatcctggacctgggcggcaac
gccgaggcgctgatcacccgcgaccagatgatcccgcgtgaagccgtgcgccagaacgac
cgcatccgcgcctatcttgctggcgtcaacccggaaaaccgtggcccgcaactgtttgcc
agccgcgccgcgccggaaatgctgatcgaactgttcaagatcgaagtgccggaaatcggc
gaagagctgatcgaaatcaagggcgctgcccgtgatcccggctcccgcgccaagatcgcc
gtgaaaaccaacgaccagcgcatcgacccggtcggtgcctgcgtcggcatgcgcggtgcg
cgcgtgcaggccgtgtccaacgaactggccggcgagcgcatcgacatcgtgctgtgggac
gacaacccggcgcagctggtgatcaacgccatgcagccggccgaagtcgcctccatcgtg
gtcgatgaagaacgccacgccatggacatcgccgtcgaagacgaatccgccctggctcag
gccatcggccgtggcggtcagaacatccgcctggcctcggaactgaccggctgggagctg
aacgtgatgacgctggatgctgcgcaggaaaagcagcaggccgagacccaggaaatcctg
gagcgcttcatcgccgacctggatgtggacgaagacattgccgccgtgctggtggaagaa
ggcttcagcacgctggaagaagtggcctatgtgccgatggaagaaatgcttgccatcgac
ggtttcgacgaagacatcgtcgaggcattgcgtcagcgcgccaaggacgccctgctgacc
cgcgcactgacctccgaagagcagcttgagcatgccgccccggcggaagacctgctcaac
atggaaggcatggaccgcgccctggccgtcaaactggccagcatgggtgtgatcaccatg
gaagatctggccgagcaggcggtggatgacctgctcgacatcgaaggcctcgacgaagag
cgggccgcgcaactgatcatgaccgcgcgcgccccctggttcgcggacgaggcagagtaa

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