Isoalcanivorax pacificus: S7S_16495
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Entry
S7S_16495 CDS
T03580
Name
(GenBank) transcription elongation factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
apac
Isoalcanivorax pacificus
Brite
KEGG Orthology (KO) [BR:
apac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apac03021
]
S7S_16495
03009 Ribosome biogenesis [BR:
apac03009
]
S7S_16495
Transcription machinery [BR:
apac03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
S7S_16495
Ribosome biogenesis [BR:
apac03009
]
Prokaryotic type
rRNA transcription factors
S7S_16495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
DUF4332
Motif
Other DBs
NCBI-ProteinID:
AJD49711
UniProt:
A0A0B4XR88
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All DBs
Position
complement(3700421..3701920)
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AA seq
499 aa
AA seq
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MNKEILLVAETVSNEKGVSRDVIFEAIELALAAATKKRFKEDDVEVRVHIDRVSGDYRTY
RVWHVVPDEDLYEFGRQLTLDEAREQDPSLNIGDTWAEEVESVAFGRIAAQTAKQVIVQK
VREAERAQIIEEYRDRIGELISGTVKKATRDSIILDLGGNAEALITRDQMIPREAVRQND
RIRAYLAGVNPENRGPQLFASRAAPEMLIELFKIEVPEIGEELIEIKGAARDPGSRAKIA
VKTNDQRIDPVGACVGMRGARVQAVSNELAGERIDIVLWDDNPAQLVINAMQPAEVASIV
VDEERHAMDIAVEDESALAQAIGRGGQNIRLASELTGWELNVMTLDAAQEKQQAETQEIL
ERFIADLDVDEDIAAVLVEEGFSTLEEVAYVPMEEMLAIDGFDEDIVEALRQRAKDALLT
RALTSEEQLEHAAPAEDLLNMEGMDRALAVKLASMGVITMEDLAEQAVDDLLDIEGLDEE
RAAQLIMTARAPWFADEAE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagatcctgctggttgcggaaaccgtatccaatgaaaagggcgtcagccgt
gacgtcatttttgaagcgattgagctggcgctggccgccgcgaccaaaaagcgcttcaag
gaagacgacgtggaagtgcgcgtgcacatcgaccgcgtgtccggtgactaccgcacctac
cgcgtatggcacgtggtgccggacgaagacctgtacgagttcggccgccagctgaccctg
gacgaagcccgcgagcaggacccgtcgctgaacatcggcgacacctgggccgaggaagtc
gagtcggtggcgtttggccgtatcgccgcgcagaccgccaagcaggtgatcgtgcagaaa
gtgcgcgaagccgagcgcgcccagatcatcgaagaataccgtgatcgtatcggcgagctg
atcagcggcaccgtcaagaaagcgacacgcgacagcatcatcctggacctgggcggcaac
gccgaggcgctgatcacccgcgaccagatgatcccgcgtgaagccgtgcgccagaacgac
cgcatccgcgcctatcttgctggcgtcaacccggaaaaccgtggcccgcaactgtttgcc
agccgcgccgcgccggaaatgctgatcgaactgttcaagatcgaagtgccggaaatcggc
gaagagctgatcgaaatcaagggcgctgcccgtgatcccggctcccgcgccaagatcgcc
gtgaaaaccaacgaccagcgcatcgacccggtcggtgcctgcgtcggcatgcgcggtgcg
cgcgtgcaggccgtgtccaacgaactggccggcgagcgcatcgacatcgtgctgtgggac
gacaacccggcgcagctggtgatcaacgccatgcagccggccgaagtcgcctccatcgtg
gtcgatgaagaacgccacgccatggacatcgccgtcgaagacgaatccgccctggctcag
gccatcggccgtggcggtcagaacatccgcctggcctcggaactgaccggctgggagctg
aacgtgatgacgctggatgctgcgcaggaaaagcagcaggccgagacccaggaaatcctg
gagcgcttcatcgccgacctggatgtggacgaagacattgccgccgtgctggtggaagaa
ggcttcagcacgctggaagaagtggcctatgtgccgatggaagaaatgcttgccatcgac
ggtttcgacgaagacatcgtcgaggcattgcgtcagcgcgccaaggacgccctgctgacc
cgcgcactgacctccgaagagcagcttgagcatgccgccccggcggaagacctgctcaac
atggaaggcatggaccgcgccctggccgtcaaactggccagcatgggtgtgatcaccatg
gaagatctggccgagcaggcggtggatgacctgctcgacatcgaaggcctcgacgaagag
cgggccgcgcaactgatcatgaccgcgcgcgccccctggttcgcggacgaggcagagtaa
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