Isoalcanivorax pacificus: S7S_17585
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Entry
S7S_17585 CDS
T03580
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
apac
Isoalcanivorax pacificus
Pathway
apac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
S7S_17585 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apac03400
]
S7S_17585 (recD)
Enzymes [BR:
apac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
S7S_17585 (recD)
DNA repair and recombination proteins [BR:
apac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
S7S_17585 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_11
SH3_13
AAA_22
UvrD-helicase
UvrD_C
Herpes_Helicase
nSTAND3
AAA_28
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AJD49929
UniProt:
A0A0B4XNI2
LinkDB
All DBs
Position
complement(3921262..3923055)
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AA seq
597 aa
AA seq
DB search
MSAALQWLEARVGRGGLRPLDVSLARFVAEHGGDDHAVWLTALVSFMSTQGHVCLDLAHA
PAEPFDLPDCPWRPDTPPPIDGTLIGAPGDNAPLILDDTRLYLSRHYQAEGRVAAAVRHR
LMLRELPTGLTGQLAGTLFPDNAEETDWQRIAAINCTLHRFGIITGGPGTGKTWTVTRML
ALQLLVAHTLAPDDPLPRIRLAAPTGKAAARLTESLRAALPSLQIDDALRDALPSEAVTL
HRLLGAGRDGRPRYTASRPLPVDIVVVDEASMIDLGLMTQLVAALPEQASLYLVGDRDQL
ASVEAGSVFADLCGQGGTQFSAPLAERLALEGIHVPDSAQQTSLVDDTVVRLTRTHRFGH
TSGIAQLAEAVRTGDVRAVQALRDTPPPDLAWAAPDRAALIQYAVNALKPMLTLAATGAP
AEDVLTAFGRFRILCALRRGPWGVEQINTQITRALRRAGLTDSEEWYPGRAVLLTRNDWA
LGLFNGDAGVAVLDPEDGQLKVAFLAPDEQVRYVPPVRLPAFEECWAMTIHKSQGSEFDE
VVLVLPESDSLILGRELVYTGITRAKERVMMTMDERSLNAAMSRSVSRHTGLGDQII
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggcgctgcaatggctggaagcacgcgtgggccgtggcggcctgcggccactg
gatgtgagcctggcgcgctttgtcgccgaacacggtggcgacgatcacgccgtctggctg
acggcgctggtcagcttcatgtcgacccagggacacgtctgccttgatctggcccacgcc
ccggcggagccgtttgatctgccggattgcccctggcgacccgacacgccgccgcccatc
gacggcacactgatcggcgcgcccggcgacaacgcgcccctgattctggatgacacccgc
ctatacctgtcgcggcattaccaggccgaaggccgcgtggccgccgccgtgcgccatcgc
ctcatgctccgcgaactgcccacgggcctgaccggccagctggccggcaccctgtttccc
gacaacgcagaggaaacagactggcaacgcatcgccgccatcaactgcaccctgcatcgc
ttcggcatcatcaccggcggccccggcaccggcaaaacctggaccgtcacgcgcatgctt
gccctgcaactgctggtcgcccacacacttgcgccggatgacccgctgccgcgcatccgc
ctcgccgcccccaccggcaaggcggcggcacgcctgacagaatccctgcgcgccgccttg
ccgtcactgcagatagatgacgcattacgcgacgccctgccgagcgaagccgtcaccctg
caccgcctgctcggcgccggccgcgacggccgcccgcgctacaccgcctcacgtccactg
ccggtggatatcgtggtcgtcgacgaagcttccatgatcgacctcggcctgatgacccaa
ctggttgccgccctgcccgaacaggccagcctgtatctggtcggcgaccgtgaccaactc
gcttccgtggaagcgggcagcgtttttgccgatctgtgtggccagggcggcacacaattt
tccgcgccacttgccgagcggctggcgctggaaggcattcatgtgccggacagcgcccag
cagaccagcttggtcgatgacaccgttgtccggctcacccgcacgcatcgcttcggacac
acttcaggtatcgcccaactcgccgaggctgtccgcacgggcgacgtacgcgccgtgcag
gcattgcgtgacacgcccccgccggacctcgcctgggccgccccggaccgcgccgcgtta
atccagtacgccgtcaacgcactgaagcccatgctcacactggccgccaccggcgccccc
gccgaagacgtcctgaccgccttcggccgcttccgcatcctctgcgccctgcgtcgcggc
ccatggggcgtcgaacagatcaacacacagatcacccgcgcactgcgccgcgccggcctc
actgacagcgaggaatggtatcccggccgcgccgtgctgctgacacgtaacgactgggcg
ctgggactgttcaacggcgatgccggcgtcgccgtcctcgacccggaagatggccagctc
aaagtcgcgttcctcgcgccggatgagcaagtgcgttatgtgccgcccgtgcgcttgccg
gcgtttgaggaatgctgggcgatgacgattcacaagagtcaggggagtgagtttgatgag
gtggtgttggtgttgccggagagtgacagcctgattctggggagagagttggtttatacc
gggattacccgcgccaaagagcgggtgatgatgaccatggatgagcgatcattgaatgct
gcgatgagtaggagtgtgtctcgtcacactggtttgggtgatcaaattatttaa
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