Isoalcanivorax pacificus: S7S_17595
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Entry
S7S_17595 CDS
T03580
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
apac
Isoalcanivorax pacificus
Pathway
apac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
S7S_17595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apac03400
]
S7S_17595
Enzymes [BR:
apac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
S7S_17595
DNA repair and recombination proteins [BR:
apac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
S7S_17595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF2789
Motif
Other DBs
NCBI-ProteinID:
AJD49931
UniProt:
A0A0B4XRW2
LinkDB
All DBs
Position
complement(3926584..3929865)
Genome browser
AA seq
1093 aa
AA seq
DB search
MHYLYQSNRLEHLAEMLAAVLRADPPAPLVPEEILVHSPGMATWLRLHLAERLGIAANFH
FPLPSSFFWQLHRQLHPALPEQSAWSKEAMLWHLMALLPDMLTQPDGAPLAEYLRDDRPL
RRFQLCQQIADLFDQYLVYRPRWMTDWERGETGDVPAHRRWQPRLWQQLAARIRALAPED
LHRGELMNATLLGQRLHQARLPKRVCLFGPTSQPAAQLEALGALGEQLDVHLFLLNPSAE
YWGHVQSDRQLARRRVEALRNGQAPEELFEETGNPLLASLGGQGRELLELLLGGLWPETV
ELDSFEAPEDTTLLGQIQADIFHLRDGRTAPRPPQTPNIQLHDCHNPMREVEVLHDRLLA
LFEQYPDLEPRDVVVMMPQVSDYAPLIEAVFGADSSHPIPWAIADRSLAEEAPVLRAFLQ
LLQPRLSRFTANEVMDLLDVAPLRERFGFSVDDLPLLRGWIEQAHIRWGLDAEHRTRLGL
PTFSENSWAAGLERLLLGVAMGEDETLWQGIPSLPGLTQGQAELAGKLAWCLRQLQRFDR
DFNQPCSAARWQQRLNLLLDDCFQEDAAWQSEIDQLRAALDTFASAAGQALDDTPLDVDM
VQGWLRQQLAGSAGGQRFLAGRVNFCTLMPMRSVPFRVVCLLGMQDDAYPRPEQPAGHDL
MRDRPLPGDRSRRSEDRYLFLEALLSARDELYISWCGRDSRDNSERPPSVVLAELTDYLD
QAFVTEDGTRLSQSLIVRHPLQPFSPRYFGGDETLFSYSSLWGDVAAGSNIASLPMSNLP
DDDTLAERLLTPGIADLARFLKNPPRALLEQRLGIYLGTRDDVLEDDEPFAPDGLDIWQL
EKDVLEQALAGEDLDDLMARWQGRGQLPPGDTGRLFLQEHVAAAEEHAQQIRRLWQAGEL
LPGADFSVTAEGVTVAGHFRELTSAGWQARNPSRLFREAPKKAAPLADSRAMPKVRHLLE
YWLMHLALNTLPLPEQARTSMLYFRDVRLQLAPLPPVQATEHLQTILQRYRRGLSTPLTF
LPQTGWAALVYPDEPARLETELLGNERSAGEAADPAVARLFPVFTDQHLRDFAREGECLL
KPLRQAAEVLPYE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcactacctgtaccagtcaaaccgcctcgaacacctcgcggaaatgctcgcagccgta
ttgcgcgccgatccccccgcgccgctggtgcctgaagaaatcctcgtgcacagccccggc
atggccacctggttgcggctgcacctggcggagcggctcggcattgccgccaactttcat
ttcccgctgccgtcctccttcttctggcaactgcaccggcaattgcacccggcgctgcca
gagcagtctgcctggagcaaagaggcgatgctctggcacctgatggcgctgctgccggac
atgctcacccagcctgacggcgcgccgctggcggaatacctgcgggatgaccgcccgctg
cgtcgcttccagctgtgccagcagattgctgacctgttcgaccagtacctcgtctaccgt
ccccgctggatgaccgactgggagcgtggcgaaacaggggacgtcccggcacaccgccgc
tggcagccacggttatggcagcaactggccgcgcgcatccgggcgctggcgccagaggat
ctgcaccggggcgaactgatgaatgccaccctgctcgggcagcgcctgcaccaggcgcgc
ctgccgaagcgtgtgtgcctgttcgggcccaccagtcagccggcggcgcaactggaagca
ctcggcgccttgggcgagcagcttgacgtgcacctgttcctgctcaaccccagcgccgag
tactggggccatgtgcaaagcgaccggcaactggcgcgccgccgcgtcgaggccctgcgc
aatggccaggcgccggaagaactgttcgaggaaaccggcaacccgctgctggcatccctc
ggtggccagggccgcgaactgctggaactgctgctcggcggcctgtggccggagaccgta
gagctggacagcttcgaggcgccggaagacaccacattgctgggccagatacaggcggac
atttttcatctgcgcgacggccgcaccgcaccgcgcccgccgcaaacaccgaacattcaa
ctgcacgactgccacaaccccatgcgcgaggtggaagtgctgcacgatcgactgctggca
ctgttcgaacagtatcccgatctcgaacctcgcgatgtggtggtgatgatgccgcaggtg
agcgactacgcgccgctgatcgaagccgtgttcggcgccgacagcagccacccgattccc
tgggcaatcgccgaccgcagcctggcggaagaagcgccggtgctgcgcgccttcctgcaa
ctgctgcaaccgcgcctgagccgtttcaccgccaacgaagtgatggacctgctggacgtg
gcgccactgcgcgaacggttcggcttcagcgtcgacgacttgccattgctgcgcggctgg
atcgagcaggcgcatatccgctggggcctggatgccgagcaccgcacccgactgggactg
ccgacgttctccgaaaacagctgggccgccggccttgaacgcctgctgctgggcgtcgcc
atgggcgaggacgaaacgctctggcaaggcattcccagcctgccggggctgacccagggg
caggcagagctggccggcaagctggcctggtgcctgcgccagttgcagcgttttgatcgg
gatttcaaccagccgtgcagtgccgcacgctggcaacagcgtctgaacctgctgctcgac
gattgcttccaggaagacgccgcctggcaaagcgagatcgaccagttgcgcgcggcgctg
gataccttcgccagcgccgcaggacaggcactggatgacacaccgctggacgtggacatg
gtgcagggctggctgcggcaacaactggccggcagtgccggcggccagcgcttcctggcc
ggccgcgtgaacttctgcacgctgatgccgatgcgcagcgtgccgttccgtgtcgtctgc
ctgcttggcatgcaggacgatgcctacccgcgccccgagcagcccgccgggcacgacctg
atgcgcgaccggcccctgccgggcgatcgctcccgccgcagcgaagaccgttacctgttt
ctcgaagccctgctgtccgcgcgcgacgagctgtacatttcctggtgcggccgcgacagc
cgcgacaacagcgagcggccaccgtccgtggtgctggcggagctgaccgattacctggac
caggctttcgtcaccgaagacggcacacgcctgtcgcagtccctgatcgtgcggcacccg
ctgcagccgttcagcccgcgctacttcggcggtgatgaaacactgttttcctattccagc
ctgtggggcgacgtggccgccggcagcaatattgcctcgctgcccatgagcaatctgccc
gacgacgacaccctggccgaacgcctgctcacgccgggcatcgccgatctcgcgcggttt
ctgaaaaatccgccgcgtgcgttgctggaacagcgcctgggcatttatctcggcacccgt
gacgacgtgctcgaagacgatgagccgttcgcgccggatggtctggatatctggcaactg
gaaaaagacgtgctcgaacaggcactggccggcgaagacctggatgatctgatggctcgc
tggcagggccgggggcagttgccgccgggtgacaccggccggctgttcctgcaggagcat
gtcgccgcggccgaagaacacgcgcaacagattcgtcgcctgtggcaggccggggagttg
ctgccgggcgcggacttcagcgttaccgcagagggcgtcacggtggccgggcattttcgc
gaactgaccagtgccggctggcaggcgcgcaacccgtcgcggctgttccgcgaggcgccc
aaaaaagccgcgccgctggccgattcccgtgccatgccgaaagtgcgtcacctgctcgaa
tactggctcatgcacctggcgctgaataccctgccactgccggaacaggcgcgcacctcc
atgctgtatttccgtgatgtgcggctgcaactggcgccgctgccgcccgtgcaggcaaca
gaacacttgcagacaatattgcagcgttatcgccgtggcctgagcacaccgttgaccttc
ctgccgcagaccggctgggccgcgctggtgtacccggacgaaccggcccggctggaaacc
gaactgctgggcaacgagcgcagcgccggcgaagccgctgacccggcggtagcgcgcctg
ttcccggtcttcaccgaccagcacctgcgcgacttcgcccgcgaaggcgagtgcctgctc
aagccgctgcgacaggctgccgaggtgctgccgtatgaatga
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