Isoalcanivorax pacificus: S7S_18005
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Entry
S7S_18005 CDS
T03580
Name
(GenBank) Rhs family protein
Organism
apac
Isoalcanivorax pacificus
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF637
TcdB_toxin_midN
Motif
Other DBs
NCBI-ProteinID:
AJD50013
UniProt:
A0A0B4XU62
LinkDB
All DBs
Position
complement(4015031..4019815)
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AA seq
1594 aa
AA seq
DB search
MPLTPVVAGGVSEDLLAEAVQFMDINNDGKIDWCIERGYAKQWHGADIKCFLGTSSGFGA
AITNYTLPDLGVNQTGLRGLREVNRGWADIYGDGEPRYCALYWKSNTPHNRGMACYGPQN
SQRQDLLLSVKNGQGLYYGVEYKDVSDPSVYDYDAEVGPEGQIYLSSGMTVVAKFMASNG
VGGLSEQSYFYKNYGYMPDERGGLGFDYERVVSEEGKKRYEAWFSHEVNRHQAGQLLRAE
TAYQVSPGNFRVVSEEEYDWKTVIYWLDGFMIHPWTDTIWNKDLPLRYTVWLLGSTSRKY
ELDGTLISTTVTENENDAYGNLASQTITTSGQNQSFTKTLTNTYQNYPEQWVLGRLTRSE
VTQAASYNGVTSAPITRTSAWEYYSPVMPGIGGMLHKEIIEPDNPALRTEKHYTYNQFGA
KSSVTAIHPGLPDQMVSYTYDHQGRFVLQEENTLGHTMSYGYDLATGNKLSQTDANGLTA
YWDYDAIGRLKTEISASGQRSQTRIGGCNTGCPALARYYTESWLESSTGARITDSSIEYV
DVLGRTIEAHSPGFSGETIIVRTQYDDKGEVTRSSEPFVYGMPTYWNTVVSRDVLGRTLE
ETTASGVQFLTEYHAYAVEQTANWSDPVSGSQISQTSVVVSDVNGNMRSATDAAQRTILY
HYDAYENLTRIDLPDQVQVENTYDVLGRRLTSTDPNIGNWQYAYDGAGRIALQENGSGRR
VCFAYDQIGRMVARVDDYLSSSSWSVAKASALNQCAGQAATTSWSYDQPAKGVGRLALLQ
DINGYSEEPFYDAFGRVLSVDIEYDGLELTGGSVYDSATGRLTQETVLHEVGGPSVTIEY
RYNNGGYLYEIGKPGLADYYWRVTDKDARGQVTERSLANGMIQGRAEYDAASGFLQAMRA
KVAYTSEWAIQNQTYAYDARGLMRQRAEQIASLNQHIQETFSYDNSNRLTNASIVNMNVP
AASYNQSVTYDVSGNILNRNDVGSYVYGEACEVNGQAYTPGPHAVTSVSGARNASYCYDG
GGNMVSGDGRTISYTSFNKPDQIQTSSASVQLIYGPSRSILKTVTTYGTESTTKYSFGAY
EKIVKTEQGQTSVKERFSLPGGAVVSFEDGVEGSKKEEYLVSDAIGSVIATVNALGGVSE
RYQYDPWGRPRASINWEAITDLIWNQIDRSDAATSKGFSGHEMLDQVGLIHMGGRVYDPT
IGRFLSADPVIKGLENTESYNRYSYVLNSPLSFTDPSGYSWLSKTWKKIRRVMKRFKLGT
FDPKHLLIEGSLKSLGKELARFAARNKYAGEVIGLVGVGACAFITGGVGAAGCVSAYQAI
VTTSISYGSGGSLSDALQAGVRAGALAYANAAFAKKIGSRGWEWHASGAAHAVRGGIFAA
AAGSDVQSGMTGGFVEGVLGDYIEIKTASDPGMGTVAAGFISGTVSEVTGGKFSVGAVTG
AMGYLFNQMGSRDFPAPAGVSRNPETLRGIKDYYASAEVRAMIGAGMNVPYPTQDMIFTE
GLSSYIQGILDIGIFFYPIGQGASWFAIGKEFRFGNNFRVAPFGNRTGHPIGRYPHYHRR
VTNPDTGVPLDGQGINRHRPVETKSTDKSFFDRF
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgccattgacgcccgtggtggccggcggtgtgagtgaggatctgctggctgaagccgtg
cagttcatggatatcaacaatgacggaaagatagattggtgcattgagcgaggctacgca
aagcaatggcatggcgcagatattaaatgcttccttggcacttcctcggggttcggggcc
gccattacaaactacacccttccggatctgggggtgaaccagaccggactgagagggctc
cgcgaggttaatcgtggctgggccgatatatacggcgacggagagccacgatattgtgcg
ctctactggaaatccaataccccacataacagaggcatggcgtgctatgggccgcaaaac
agccagcggcaagaccttctgttatccgtgaagaacggacaaggcctttactacggcgtt
gaatacaaagacgtatcagacccaagcgtttatgactatgacgcagaggtcggcccagag
ggccagatatacctgagttcgggcatgacggtggtcgctaagttcatggcttcgaatggg
gtagggggcctatcagagcaaagctatttttataagaactatgggtacatgccggatgaa
cggggcgggctgggttttgattatgagcgggtggtttcagaagaagggaaaaagcgatat
gaagcgtggttcagccatgaggtgaaccgccatcaggccggccaactgcttcgtgctgaa
acagcttaccaagtctccccgggcaacttcagagtcgtctccgaagaagaatatgattgg
aagacagtaatatactggttagacgggttcatgatacatccgtggacagatacgatctgg
aataaggatttgcctctaagatacacggtatggctgctcggcagtacttccaggaagtat
gagctcgacggaacactaataagcaccacagtgacagagaacgagaatgacgcctatggc
aatctggcaagccaaaccatcacgacgtccggccaaaatcagtctttcaccaagacgctg
acaaatacctatcagaattatcctgaacagtgggtgctcggacgtttaacaagatcggaa
gtgacacaggctgcaagttataacggtgtgacatctgcgccgataacacgtacctctgcc
tgggagtattactcgccagtcatgccgggtattggcggtatgctgcacaaggaaatcatc
gagccagacaatccggcgctgcgcacggagaaacactacacctacaatcaattcggagcg
aagtcgtccgtaaccgctattcatcccggtttgcccgaccagatggtgtcgtatacctat
gatcatcagggtcggtttgtgctgcaagaggagaatacgctgggtcataccatgagctat
gggtacgacctggccacaggcaacaagctcagtcagaccgatgcgaatggactgacggct
tattgggattatgatgccatcgggcgcctgaagaccgagatatctgcatctggccaacga
agtcaaacgagaattggcggctgcaatactggatgcccagctttggcgcggtactacact
gagtcctggttggaatcgagtacgggcgcgagaataacagactcgtcaattgaatatgta
gatgtgcttggaagaacaatcgaggcgcattcacctggcttctctggcgagacgatcatt
gtccgtacccaatacgatgataaaggtgaggtaacacgcagctccgagccgtttgtatat
ggcatgccgacttactggaacacagtagtgagccgggacgtcctgggacgtactttggag
gaaactacggcctccggcgtacagttcctcacggagtatcatgcctatgccgttgagcag
accgctaactggagtgatcctgtctccggtagccagatatcccaaaccagcgtggtggtc
agcgatgtaaacggcaatatgcgttcggctactgacgcggctcagcgcaccattctttat
cactatgatgcttatgaaaatctgaccaggattgatttgccggatcaagtacaggttgaa
aacacctatgatgtgcttggcagacggttgacatccaccgaccccaatatcggaaactgg
cagtacgcatacgacggtgccgggcgcatagcgctgcaggaaaatggtagcggtcgccga
gtatgtttcgcctacgatcagatcgggcgcatggttgcccgcgtagatgattatctgtct
tcatccagctggtctgttgcgaaagcatctgccctgaaccaatgcgcgggccaggcagct
acaacttcctggtcgtatgaccagccggcgaaaggcgtgggtcgcctggcgttgctgcag
gatatcaatggatactcagaagagcctttctatgatgcctttgggcgggttctgtcagtt
gatattgaatacgatggtttggagcttaccggtggttccgtctatgacagcgcgaccggc
aggctcacgcaagaaaccgtgctgcacgaagtgggtgggccttcggtaaccattgagtat
cgatacaacaatggcgggtacctctacgaaatcggcaagccaggtctggcggattactac
tggcgggtgacagacaaggatgcccggggtcaggtgacagaaagaagcctggcgaatggc
atgattcaggggcgggcggagtatgatgcagcgtccggcttccttcaggcgatgcgtgca
aaggttgcctatacatcggaatgggccattcagaaccagacttacgcctatgacgcgcgt
ggcttgatgcggcaacgggcggagcagattgcctcactgaaccagcatattcaggagacg
ttttcctacgacaatagcaaccggcttaccaacgcgtcgattgttaatatgaatgtgcca
gcggcatcttataaccagtcggtcacttacgatgtatcgggtaacatcctgaacaggaac
gatgttggctcctacgtctatggagaggcttgtgaagtaaacgggcaggcctatacgcct
gggccgcacgcggttaccagcgtctcgggcgcccgaaacgcgagctattgctacgatggc
ggcggcaatatggtgtctggagatggtcgcactatttcctatacctccttcaacaagccg
gatcaaattcaaacctctagtgcgtcggttcagcttatatatggaccttcgcgcagtatt
ctgaagacagtgactacttacggaacagagtcaaccacgaagtactcatttggtgcctac
gagaagatcgtcaagacggaacagggccagaccagcgtcaaggagcgattctcgctgcct
ggcggtgcggttgtttcgtttgaagacggagtggaaggttccaagaaggaagaatatctg
gtatctgatgcgataggttccgttattgcaacggtcaatgcgttgggcggtgtcagtgag
cgatatcaatatgatccatggggacggccaagggcgtccatcaactgggaagcgatcact
gatctaatatggaaccagattgatcgtagcgacgcagccaccagtaaaggcttctcaggt
catgagatgttggatcaagtggggctgatccatatgggtggccgagtgtacgacccaact
ataggtagattccttagtgctgacccggtaatcaaagggcttgagaacaccgagagttat
aaccgatacagttatgttctaaacagtcctttgagcttcacagatccgtctggatactcg
tggttaagtaaaacatggaagaaaattcgaagggtaatgaaaagatttaaattgggcacc
tttgatccaaaacacttacttatagaggggtctttgaagtctctagggaaggagcttgcc
agatttgcagctagaaataaatatgcaggggaagttatagggcttgtcggagtaggtgca
tgtgcttttatcacagggggagttggtgcggctggttgtgtttctgcctaccaggccatc
gttacgacaagtatttcatacggtagtggaggctcattatcagatgctttgcaagctggt
gttagggctggtgccttggcctatgcaaatgccgcttttgcaaagaagattgggagcagg
gggtgggagtggcacgctagtggggctgcacatgctgtgcgaggcggcatctttgcagcc
gcggctggttcagatgtgcaatcgggaatgacgggtggtttcgttgaaggggttcttggt
gactatatagaaattaagaccgccagcgatccggggatgggaactgtagctgccggtttt
attagtggaacagtctctgaagttactggggggaaattttctgtaggcgcagtaactgga
gcaatgggatacttattcaatcagatgggtagtagggactttcctgctcctgccggggta
tcaagaaacccagaaacattgagaggtattaaagattactatgcatcggccgaggtaagg
gcgatgataggcgctggaatgaacgttccctacccaactcaggatatgatatttacggaa
gggttgtcatcgtacatacagggaattctggatattgggatatttttttatccaataggc
cagggcgcaagctggtttgcaataggtaaagagtttcgctttggaaataactttagggtt
gctcctttcggtaataggacaggtcatcctataggtagatacccgcactaccatcgacgt
gtaacaaacccggatacaggggtgccactcgatggccaaggtattaataggcatcgtcca
gttgagacgaaatctaccgataaaagtttcttcgatagattttaa
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