Isoalcanivorax pacificus: S7S_18075
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Entry
S7S_18075 CDS
T03580
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apac
Isoalcanivorax pacificus
Pathway
apac03420
Nucleotide excision repair
apac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
S7S_18075
03430 Mismatch repair
S7S_18075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apac03400
]
S7S_18075
Enzymes [BR:
apac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
S7S_18075
DNA repair and recombination proteins [BR:
apac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
S7S_18075
MMR (mismatch excision repair)
Other MMR factors
S7S_18075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
FitA-like_RHH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJD50027
UniProt:
A0A0B4XUU7
LinkDB
All DBs
Position
complement(4033641..4035818)
Genome browser
AA seq
725 aa
AA seq
DB search
MNDATDLLDELLDGLNPAQRDAVAADDPYLLVLAGAGSGKTRVLVHRIAFLVATEQASPY
GILAVTFTNKAAAEMRGRIEQLLRMPASGMWVGTFHGIAHRLLRAHWQEAGLPDGFTILD
SDDQLRLVKRVIRELGLDEQRWPARQAQWFINSQKDEGLRAAHMEPGGDLFLLTMQKIYT
TYEEACARGGLVDFNELLLRALELIRDNDELRGHYQRRFRHILVDEFQDTNAIQYAWLQL
LSGGGAAVTIVGDDDQSIYGWRGAKIENIQRLAKDFPGLRTIRLEQNYRSTGTILQAANA
VIANNSDRLGKELWTEISEGEPIRVYTGFNEVDEARFIAGRVQKHQDEGISRSEMAVLYR
SNAQSRVLEEAFLQAGIPYRIYGGQRFFERAEIRNALGYLRLLVNRDADAAFERVVNTPT
RGIGDKTLDALRERARQAGQSLWRTALQMISDGSLPGRAASALGGFVSLIEQMTKDTQDL
ALWERTEHILAASGLLEFHANEKGEKGQQRVENLRELITATRQFGDEDVEDGADVLTAFL
DHAALEAGERQAGEHDEAVQMMTLHSAKGLEFPVVFMAGLEEGLFPHQMSAEEPGRLAEE
RRLCYVGITRAMRQLYLTYAESRRLHGSETMNAPSRFLREIPAALLEEVRLRGGMSRPVA
ASSGSPVRGEEVGGYRLGMRVMHPKFGEGTILHFEGQGPNARLQINFDGAGSKWLVSQYA
RLEVI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgcaaccgatctacttgatgaactcctggatggcctgaaccccgcgcaacgt
gacgccgtggcggcggacgacccgtatctgctggtgctggccggtgccggctcgggcaag
acccgtgtgctggtgcaccggattgcctttctggtggccactgagcaggcctcgccatac
ggcattctggccgtcacctttaccaacaaggccgccgccgaaatgcgcgggcgcattgaa
caattgttgcgcatgccggcctccggcatgtgggtgggcaccttccacggcatcgcccac
cggctgctgcgtgcccattggcaggaagccggcctgccggacggcttcaccatccttgat
tccgacgaccagttgcggctggtgaagcgggtgatccgtgaactgggcctggatgaacag
cgctggccggcacgccaggcgcaatggttcatcaacagccagaaggacgagggcctgcgc
gccgcgcacatggagcccggcggggacctgttcctgctcaccatgcagaagatctacacc
acctatgaagaagcctgcgcccggggcgggctggtggatttcaacgagctgctgctgcgc
gcgctggagctgatccgcgacaacgacgaactgcgtggccactaccagcgccgtttccgg
catatcctggtggacgaatttcaggacaccaacgcgatccagtacgcctggctgcaactg
ctgtccggcggcggcgcggcggtgacgatcgtcggggacgatgaccagtccatctacggc
tggcgcggtgcgaagatcgagaacatccagcgtctggcgaaagattttcccggcctgcgc
accattcgcctggaacagaactaccgttccacaggcaccattctgcaagccgccaacgcg
gtgatcgccaacaatagcgaccggctcggcaaagagctctggaccgagatcagcgaaggc
gaaccgatccgtgtctataccggcttcaatgaggtggacgaggcacgctttatcgccggc
cgggtgcagaaacatcaggatgaaggcatcagccgcagtgagatggcggtgctgtaccgt
tccaacgcccagtcgcgagtgctggaagaagcctttctgcaggccggcatcccgtaccgc
atctatggcgggcagcgcttcttcgagcgggctgaaatccgcaatgcgctgggttacctg
cgcctgctggtgaaccgtgatgccgacgccgccttcgagcgggtggtgaacacaccgaca
cgcggcatcggcgacaagaccctggatgccctgcgcgaacgcgcccggcaggccggccag
agcctgtggcgcacggcgctgcagatgatcagtgatggctcactgccgggccgcgcggcc
agcgcactgggcggttttgtgtcgctgatcgagcagatgacaaaggacacgcaggatctc
gcgttgtgggagcgcaccgagcatattcttgccgcctccgggctgctggaattccacgcc
aacgaaaagggcgagaagggccagcaacgggtcgagaacctgcgcgaactgatcacggcc
acacgtcagttcggcgatgaggacgtggaagatggcgccgacgtgctgaccgccttcctg
gaccacgctgcgctggaagcgggcgagcgccaggccggcgaacacgatgaggcggtgcag
atgatgacgctgcactcggccaagggcctggaattcccggtggtgttcatggccggcctg
gaagagggcctgttcccgcaccagatgtccgccgaggagcctggccggctggcggaggag
cgccggctttgctacgtggggattacccgcgccatgcgccagctctacctcacctatgcg
gaaagccgccgcctgcacggcagcgagacgatgaatgcgccgtcgcgtttcctgcgcgaa
atcccggcggcgttgctggaggaagtgcgtctgcgcggcggcatgtcacgcccggtggcg
gcgtccagcggcagtccggtgcgcggtgaggaagtgggcggctatcgcctgggcatgcgg
gtgatgcacccgaaattcggcgaagggaccattctgcattttgaagggcaggggccgaat
gcgcgcttgcagatcaacttcgatggcgccggcagcaaatggctggtgagccagtacgcc
cgcctggaagtcatctga
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