Avibacterium paragallinarum: EIA51_05150
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Entry
EIA51_05150 CDS
T05728
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apag
Avibacterium paragallinarum
Pathway
apag03420
Nucleotide excision repair
apag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EIA51_05150 (uvrD)
03430 Mismatch repair
EIA51_05150 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apag03400
]
EIA51_05150 (uvrD)
Enzymes [BR:
apag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EIA51_05150 (uvrD)
DNA repair and recombination proteins [BR:
apag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EIA51_05150 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
EIA51_05150 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PhoH
Motif
Other DBs
NCBI-ProteinID:
AZI14058
LinkDB
All DBs
Position
1056683..1058866
Genome browser
AA seq
727 aa
AA seq
DB search
MDISELLDGLNDKQREAVAAPLGNYLVLAGAGSGKTRVLTYRIAWLIDVEQISEGSIMAV
TFTNKAAAEMRHRIESTLAKYSSQRILGMWIGTFHSIAHRLLRAHYADAGLPQDFQILDS
DDQLRLVKRLIKLHNIDEQAFPPKQACWYINNKKEEGLRPQQIDDNNDRQERTWIKIYQI
YQDACDRAGLLDFAELLLRAYELWLKKPLILQRYQQRFSQILVDEFQDTNKIQYAWIKLL
VGDTGKIMIVGDDDQSIYGWRGAQVENIHRFLEDFHQAQTIRLEQNYRSTSNILNSANHL
IVNNSNRLGKELWTEGEQGDPVGIYAAFNEIDEAQFVANQINIWLDEGGKLNDCAILYRS
NSQSRVIEEALIRAQIPYRIYGGLRFFERQEIKDALAYLRLIANRFDDAAFERVINTPAR
GIGDRTLDVLRQLTRERQITLWQAIQVAIQENRLAGRSATALLRFTELINSLQQDTAEMP
LFAQTDFVIKHSGLYQMYKQEKGEKGEVRIENLEELVSATREFIKPEDAEEMTDLMAFLT
HASLESGEEQASPHQASVQMMTLHSAKGLEFERVFIVGVEEGIFPSARSFEEGRMEEERR
LAYVGITRAKQKLTISYAESRRLYGKEERHLPSRFIEELPKECIQEVRLRGTVTRAYNRA
AVGALNTSSTQNDSGWKMGQKVKHAKFGNGTIINVEGSDNNTRLQIAFQGEGIKWLIATL
ANLERIN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggatatttctgaattacttgatggattaaatgacaaacagcgtgaagccgtggctgct
ccgctaggcaattatcttgtactcgctggggcggggagtggtaaaacgcgggtgctgact
tataggattgcttggcttatcgacgttgagcaaatttctgagggcagtattatggctgta
acctttaccaataaagcggcggcggaaatgcgtcatcggatagaaagcacgttggcgaaa
tactcatctcaacgcattttaggaatgtggatcggcacatttcatagcattgctcaccgc
ttgttacgtgctcattatgccgatgcgggcttaccgcaagattttcagatcttagacagc
gacgaccaacttcgcttggttaaacgtttgattaaacttcacaatattgatgaacaagct
ttcccgcccaaacaggcttgttggtacatcaataataaaaaagaagaggggctacgcccg
cagcagattgatgataataatgatcgtcaagagcggacttggattaaaatttatcaaatt
tatcaagatgcgtgcgatcgtgcgggcttgttggattttgccgaattgttgttgcgagct
tacgaactatggttgaaaaagcccttgattttacagcgttatcagcaacgcttctcacaa
attttagtggacgagtttcaggataccaataaaattcaatacgcgtggatcaagctctta
gtgggcgatacgggcaaaattatgatcgtgggcgatgacgatcagtctatttacggctgg
cgtggggcgcaggtggaaaatatccatcgcttcttggaagattttcatcaagcccaaacg
atccgtttggagcagaattatcgctcaaccagcaatattcttaacagtgccaatcatctc
attgtcaacaacagcaaccgtcttggcaaagaattgtggacagagggagagcagggcgat
cccgttggcatttacgccgcgtttaatgaaattgatgaagcacaatttgtggcaaatcaa
atcaatatctggcttgatgagggcggaaagttgaacgattgtgcgattttataccgcagc
aacagccaatctcgcgttattgaagaagccctaatccgtgcacaaattccttaccgcatt
tatggcgggctacgcttctttgaacgccaagaaatcaaagatgccttagcctatctgcgt
ttaatcgccaatcgttttgatgatgctgcctttgaacgagtgattaatacccccgcacgg
ggcattggtgatcgcaccttagacgtgttgcgtcaattaacccgagaacggcaaattacg
ctttggcaagccattcaagttgcaatccaagaaaataggctcgcagggcgttccgcgaca
gcgttgttgcgttttaccgaattgattaattccttacagcaagacaccgcagaaatgcca
ctttttgcccagactgattttgttattaaacattcaggcttgtatcaaatgtacaaacag
gaaaaaggggaaaagggcgaagtgcggatcgaaaacttggaggaattggtgagtgccacc
agagagtttatcaaaccagaagacgcagaagaaatgacggatttaatggcatttttgacg
catgcttcattggaatcaggggaagaacaagcctcgccacatcaagccagcgtgcaaatg
atgaccttgcattccgcgaaaggcttagagtttgaacgcgtgtttattgtcggcgtggaa
gagggcattttcccaagcgctcgttcttttgaagaggggcgaatggaggaagaacgccgt
ttggcatatgtgggcattacgcgagcgaaacaaaaactcaccattagctatgcggaaagt
cgccgtttatatggcaaagaagagcgtcatttaccctcccgttttattgaagaattgccg
aaagaatgtattcaagaagtgcgtttgcgaggcacagtaacgcgagcctacaaccgtgcg
gcggtaggggcgttaaatacgtcatcaacccaaaacgatagcggttggaaaatgggccaa
aaagtcaaacacgccaaatttggcaacggcacgattattaatgttgaaggctcagacaac
aacacccgcctacaaatcgcctttcaaggtgaggggattaagtggctaattgcaacttta
gctaatttagaaagaattaattaa
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