KEGG   Avibacterium paragallinarum: EIA51_05475
Entry
EIA51_05475       CDS       T05728                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
apag  Avibacterium paragallinarum
Pathway
apag03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:apag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EIA51_05475 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apag03400]
    EIA51_05475 (uvrB)
DNA repair and recombination proteins [BR:apag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EIA51_05475 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EIA51_05475 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD UB2H AAA_30 Ribosomal_L12 PMT2_N AAA_22 DUF87
Other DBs
NCBI-ProteinID: AZI14118
LinkDB
Position
1125287..1127323
AA seq 678 aa
MSNKIKGKPFILHSDFSPSGDQPQAIEMLCENLNAGLAHQTLLGVTGSGKTFTIANVIAK
LNRPAMLLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASV
NDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYLKMMLHLQTGAIINQRQILAK
LAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDNQAIRIELFDDEIERLSLFDPLTGANF
GAVPRYTIYPKTHYVTPRERILEAIDQIKIELAKRREYFIKENKLLEEQRITQRTLFDIE
MMNELGYCSGIENYSRYLSGRKEGDPPPTLFDYLPLDGLLIIDESHVTIPQIGGMYRGDR
SRKETLVEYGFRLPSALDNRPLKFEEFERLAPQTIYVSATPGPYELEKSGSEIIDQVVRP
TGLLDPVIEIRPVAIQVDDLLSEAKQRADKNERVLVTTLTKRMAEDLTDYLEEHGVRVRY
LHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNLNGKAILYADHITKSMEKAITETNRRREKQMKYNAEQGIVPQALNKKVGE
LLDIGQGATNNKAKSKQKQKTVSEPTALYQPLNAKEFQQQVKKLEQQMYKHAQDLEFEKA
AAVRDQLQQLRERFLDLK
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgagtaacaaaattaagggcaaaccttttattctccattctgatttttcaccttcaggt
gatcaaccacaggcgatcgaaatgctctgtgaaaatcttaatgctggtttagcacatcaa
accctacttggtgtaacggggtcaggaaaaacgttcacaatcgccaacgtgattgcaaaa
ttaaaccgtccagcaatgttacttgctccaaataaaacccttgccgctcaactttatgca
gaaatgaaagctttctttcctgaaaatgcggtggaatattttgtgtcgtattatgattat
taccagcctgaagcctatgtaccgagtagtgatacctttattgaaaaagatgcttcagtt
aatgatcaaattgaacaaatgcgattgtctgccacgaaatcttttttagaacgccgcgat
accatcgttgttgcctcagtgtctgctatttatggattgggtgatccggatagctacctc
aaaatgatgttgcatttgcaaacaggagcgattattaatcagcgtcaaattttggcaaaa
ctggcggagttgcaatatacccgtaatgatcaagctttccaacgaggaacattccgcgta
cgtggtgaaattattgatatatttcctgcggaatcggataaccaagctattcgcattgaa
ttatttgatgacgaaatcgaacggctcagcttatttgatccgctgactggagcaaatttt
ggtgctgtgccacgctacacgatctacccgaaaacgcattatgtcacccctcgtgaacgg
attttagaagctattgatcaaattaaaattgagctggctaaacggcgagaatatttcatc
aaagaaaataaattattagaagaacaacgtatcacacaacgaacattgtttgatattgaa
atgatgaacgagctaggctactgttcaggaattgaaaattactcccgctatttatcggga
cgtaaggagggcgatccgccaccaaccttgtttgattatttgcctcttgatggcttactg
attattgatgaatcgcacgttaccattccccaaatcggcggaatgtaccgtggcgaccgc
tcacgcaaagaaacgttagtggaatatggcttccgcttaccatcagcactggataaccgc
ccattaaaatttgaagaatttgaacgcttagcaccgcaaacgatttatgtttctgccacg
ccgggcccttacgaattagaaaaatcgggcagtgaaattatcgatcaagtggtgcgacca
acgggcttgcttgatcctgtaattgaaattcgccctgttgccattcaagttgatgatttg
ctttctgaagcaaaacaaagagcggataaaaatgaacgggttttagttaccacgctcacc
aaacgaatggcggaagatctcacggattaccttgaagaacacggcgtgcgtgtgcgttat
ttgcattccgatattgacacggtggaacgagttgaaattatccgcgatctccgcttaggg
gaattcgacgtgctagtgggaattaacttattgcgggaagggctggatattcccgaagtg
tcccttgttgccattttagatgcggataaagaaggcttcttgcgttccgaacgctcgcta
atccaaaccattgggcgtgcggcgagaaatcttaatggtaaagccattttgtatgcagat
cacatcaccaaatcaatggaaaaagccatcacagaaaccaaccgccgccgcgaaaaacaa
atgaaatataatgcagagcagggcattgtaccgcaggcattaaacaaaaaagtgggcgaa
ttgctcgacattggacaaggtgcaacaaataacaaagcgaaaagcaaacaaaaacaaaaa
acagtgtcagaaccgaccgcactttaccaaccgctcaacgccaaggaatttcagcaacaa
gttaaaaaactggaacaacaaatgtacaaacacgcccaagatctggaatttgaaaaagcc
gccgcagtgcgggatcagctgcagcaattgagggaaagatttttagatttgaagtaa

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