Avibacterium paragallinarum: EIA51_10280
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Entry
EIA51_10280 CDS
T05728
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
apag
Avibacterium paragallinarum
Pathway
apag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIA51_10280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apag03019
]
EIA51_10280
03009 Ribosome biogenesis [BR:
apag03009
]
EIA51_10280
Enzymes [BR:
apag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EIA51_10280
Messenger RNA biogenesis [BR:
apag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EIA51_10280
Ribosome biogenesis [BR:
apag03009
]
Prokaryotic type
rRNA helicases
EIA51_10280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
DRTGG
Phage_TAC_5
Motif
Other DBs
NCBI-ProteinID:
AZI14947
LinkDB
All DBs
Position
2156657..2158453
Genome browser
AA seq
598 aa
AA seq
DB search
MTETKITFNDLGLPEFILNAVTDMGFESPSPIQQACIPHLLAGQDVLGMAQTGSGKTAAF
SLPLLAQIEPQKKMPQMLVMAPTRELAIQVADACEQFMKYAKGINIVTLYGGQRYDIQLR
ALKQGAQVVVGTPGRILDHLRRNTLDLSELKFIVLDEADEMLRMGFIDDVETVMAALPEQ
HQTALFSATMPEPIRRITKRFMNNPQEVKIQSSQKNAPDITQSCWYVRGFRKNEALLRFL
EVEEFDAAIIFARTKTATLDITELLEKHGFRAAALNGDMTQQLREQTLDRLRNGSLDILV
ATDVAARGLDVERISLVVNYDIPLDAESYVHRIGRTGRAGRAGRALLFVEPRENRLLKNI
ERLMKKPIDEVEIPNHEALQACRRKNFVAKITKQLEHHDLELYRSLLEDLFTADQDQEDI
AAAMLMLLQGKQKLILPPDPTIDKRAGRERNRRENPRSAERRGYGIPQPMDLYRIEVGRL
DGVEVRHIVGAVANEGDIDSRYIGHIKLYDNYSTIELPQGMPKELVAHFTKTRVMNKPMQ
MSLLGEAKNEGRGGEKRFAGKTKGRNNDSRTGDRKFREKKHRTFDDSGFKPHSKRKKY
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacaaaaatcacttttaatgatttaggtttacctgaatttatccttaatgca
gtaacagatatgggatttgaatccccttcaccaatccaacaggcttgtatccctcacctt
ttagctgggcaagatgtgctaggaatggcacaaacaggaagcggaaaaaccgccgcgttc
tcccttccactgttggctcaaatcgaaccgcagaaaaaaatgccacaaatgctcgtgatg
gcaccgacccgcgagcttgctattcaagtggcagacgcctgcgagcaatttatgaaatat
gccaaaggcattaacatcgtaaccctttacggcgggcaacgttatgacattcaactcaga
gccttaaaacaaggtgcacaagtggttgtcggcacaccggggcgtatcctcgatcaccta
agacgcaacacccttgatctgtcagaattaaaatttatcgtgcttgatgaagctgatgaa
atgttacgaatgggctttattgatgatgttgaaaccgtaatggcagcactgccagaacag
catcaaaccgcacttttctccgccacaatgccagaaccaatccgccgcattacaaaacgc
tttatgaataatcctcaagaagtgaaaattcaatcaagccaaaaaaatgccccagatatt
acccaaagttgctggtatgtgcgtggtttccgcaaaaatgaagctctcttgcgtttcctt
gaagtggaagaatttgatgcggcaatcatctttgctcgcaccaaaactgctacccttgat
attaccgaattattggaaaaacacggcttccgtgccgccgcactcaatggggatatgacc
caacaactgcgtgaacaaaccctcgatcgcctgcgtaatggcagcctagatattttagtc
gccactgatgttgccgctcgtggacttgatgtggagcgtatcagccttgtggtgaattac
gatattccacttgatgccgaaagttatgtgcaccgtattgggcgtacagggcgtgctggg
cgcgcaggacgtgcgttattgtttgtcgaacctcgcgaaaatcgcctactgaaaaatatt
gaacgtctaatgaaaaagccgattgatgaagtagaaataccaaatcacgaagcattacaa
gcttgtcgtcgcaaaaattttgtggccaaaattacaaaacaacttgagcatcacgatctt
gaactgtaccgcagcctacttgaagatctgtttaccgcagaccaagatcaagaagacatc
gcggcagcaatgttaatgctattacaaggcaaacaaaaattgattcttcctcccgatcct
accattgacaaacgtgcagggcgtgaacgcaatcgccgtgaaaaccctcgctcagcagaa
cgccgtggctacggcatcccgcaaccaatggatctctaccgcattgaggtaggacgttta
gacggtgtggaagtgcgtcatatcgttggagcagtggcaaacgaaggggacattgacagc
cgttatatcggacatatcaaactctacgacaactactccaccatcgaattaccgcaagga
atgcctaaagaactcgtggcacatttcaccaaaacccgcgtaatgaacaaaccaatgcaa
atgtcattacttggtgaagccaaaaacgaaggcagaggcggcgaaaaacgctttgccggc
aaaaccaaaggccgcaacaacgacagccgcacaggcgatcgaaaattcagagaaaaaaaa
caccgcacttttgatgacagcggcttcaaaccacattcaaaacggaaaaaatattaa
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