Aquidulcibacter paucihalophilus: KB221_01445
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Entry
KB221_01445 CDS
T09139
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
apah
Aquidulcibacter paucihalophilus
Pathway
apah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KB221_01445 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apah03019
]
KB221_01445 (recQ)
03400 DNA repair and recombination proteins [BR:
apah03400
]
KB221_01445 (recQ)
Enzymes [BR:
apah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KB221_01445 (recQ)
Messenger RNA biogenesis [BR:
apah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KB221_01445 (recQ)
DNA repair and recombination proteins [BR:
apah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KB221_01445 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
Rhodanese
DUF362
Motif
Other DBs
NCBI-ProteinID:
WIY70845
LinkDB
All DBs
Position
complement(272961..274832)
Genome browser
AA seq
623 aa
AA seq
DB search
MFADSILSPPALSLADARATLERVWGHADFRGRQAEVVTEILAGRDVVAVLPTGGGKSVC
YQIPAMLRPGLGLVVSPLIALMTDQVEALKQQGVAAARLDSGVSMDDRSAIWRQARAGEL
DLLYVSPEGLAQPHLIDRLHDLPLSLIAIDEAHCVSQWGHDFRPDYRTLGRLAELFPGVP
RIAVTATADARTRDDIVRSLRLDDAKVVVDSFARPNLQLSAIRKESASRARTDAAVIDLV
RQRRGKSGVVYCGSRDGCERVAQALREAGTNAIAYHAGMDARDRDRRLERFLAEDGAVMV
ATIAFGMGVDKADVRFVIHADPPGSLEAYWQEIGRAGRDGEPADGITLYGPSDIAWTLKR
LEGRPMAEEVKAVQVRKARQLFAMLDGAVCRAQAVRRYFGEEGAERCGVCDLCLDPPAVF
DATVPAQKALAAVQRLGERFGKTRVIDHLLGKTKDVQPWETALSTWAIGADTGQHTWRDV
VDHLMFEGLLVEDPNEGKPLVRLGDPEAVRAVYRGERAIEVRAAAARAATAPRERTRTGR
NAALETMDADVRARFEILRTWRRDRAAEQRVPPYVIFQDKTLLEIALAEPADLERLGHIS
GVGQTRLDRYGKGVLEALRQGAA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgactcgatcctttccccgcccgccctgtcgctcgccgacgcgcgggcgacg
ctggagcgggtctggggccatgccgatttccgcgggcgccaggctgaggtggtgaccgaa
atcctcgccgggcgcgacgtcgtcgccgtcctgccgaccggcggcggcaagagcgtctgc
taccagatcccggccatgctccggcccgggctgggtctcgtcgtctcgcccctgatcgcc
ctgatgaccgaccaggtcgaggcgctgaaacagcagggggtggcggccgcgcggctcgac
tcgggcgtctccatggacgaccgctcggccatctggcgtcaggcccgggcgggggagctg
gacctgctttatgtctcacccgagggactggcccagccgcatctgatcgaccggctgcac
gacctgcctctgagcctgatcgccatcgacgaagcgcattgtgtctcacagtggggacat
gatttccgtccggattacaggaccctgggccgactggccgagctgttcccgggcgtgccg
cggatcgccgtcaccgccaccgccgacgcccgaacccgcgacgacatcgtccgttcgcta
cggctggacgatgcgaaggtcgtggtcgacagcttcgcccggccgaatctgcaactctcg
gcgatccgcaaggaaagcgcatcgcgggcccgcacggacgccgccgtcatcgatctggtg
cgccagcggcgcggcaagtccggggtggtctattgcggcagccgcgacggctgcgaacgg
gtcgcccaggccctgcgcgaggccgggaccaacgccatcgcctatcacgccggtatggac
gcccgcgaccgcgaccgccggctagagcggttcctggccgaggacggggcggtcatggtg
gcgaccatcgccttcggcatgggagtcgacaaggccgacgtccgtttcgtcatccacgcc
gatccgccaggctcgctcgaggcctactggcaggagatcggccgggccggccgcgacggc
gaacccgccgacggcatcaccctgtacggcccctccgacatcgcctggacgctgaaacgg
ctcgagggccgccccatggccgaggaggtcaaggcggtgcaggtccgcaaggcccgccag
ctgttcgccatgctcgacggcgccgtctgtcgcgcccaggccgtgcgccgctatttcggg
gaagaaggcgccgaacgctgcggcgtctgcgacctgtgcctcgacccgcccgccgtcttc
gacgccaccgtcccggcccagaaggcgctggcggcggtgcagcggctgggcgagcggttc
ggcaagacccgcgtcatcgaccacctgctgggcaagacgaaggacgtccagccctgggag
acggccctgtccacctgggccatcggcgccgacacgggccagcacacctggcgcgacgtg
gtcgaccatctgatgttcgaagggctgctggtcgaggacccgaatgagggcaagccgctg
gtccggctgggcgatcccgaggccgtgcgcgccgtctatcgcggcgaacgcgccattgag
gtgcgcgccgccgccgcccgcgccgccacagccccgcgcgagcggacgcgcacgggccgc
aacgccgcgctcgagaccatggacgccgacgtccgcgcccggttcgagatcctgcggacc
tggcgccgcgaccgggccgccgaacagcgcgtccccccctatgtgattttccaggacaag
accctgctggaaatcgccctcgccgaaccggccgacctcgagcggctgggccatatctcc
ggcgtcggccagacccggctggaccgctatggcaagggcgtactggaggccctgcggcag
ggcgcggcctga
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