Aquidulcibacter paucihalophilus: KB221_01525
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Entry
KB221_01525 CDS
T09139
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
apah
Aquidulcibacter paucihalophilus
Brite
KEGG Orthology (KO) [BR:
apah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apah03400
]
KB221_01525 (addB)
Enzymes [BR:
apah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KB221_01525 (addB)
DNA repair and recombination proteins [BR:
apah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KB221_01525 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Peptidase_C7
Motif
Other DBs
NCBI-ProteinID:
WIY69717
LinkDB
All DBs
Position
complement(290194..293280)
Genome browser
AA seq
1028 aa
AA seq
DB search
MTARFDPFQPAGPRWYAIEARRPFLEDLAAGVLDWLGDHPPETLSDAVILLPNRRAARAF
TAALTRQAGGRAILLPQVRPLGDLEEDEPPFAPGELGLDLPPAIAPLTRRFEMARMIVED
FRPGLSPLRALEMADALGGFLDSCQLEEVEDLHRVATLVEEDLAEHWRESAEFLALAVEA
WPKRLEAMGLVDPAWRRARLLRLLATAWTERPPTQTVIAAGSTGTAPAAAAVLAAVAAAP
RGCVVLPGLDRELDPAVWATLGDNEQHPQNALWRLLDGRAEREEVRPWFEPAEDPVSRRR
DRARQRLINEALRPADATDDWRTVISTLRKDAFREQSADPIAQGLEGLSVVTVRAEEDAA
AALALMMRETLETPGKTCALVTPDLALGRRVAARLERWGGVADVSSGQPLSRMDAGRLID
LAVRFVAKPLDPHALLGLLKHPLARLDLGETDSAVARQALEHHALRGPRHRDWARLRRAL
LKAGEPRDDGKAPSEGTRARLAAATTLVDRLETLSAAALAPFTPDAPLDVAARGLTELIE
ALAGQDAWAGPDGEAAAALLSGLIEGGASLGPVSRAEFADLIRSLLAEETVRTGGANQPR
LRILGAIEARLVRADRMILAGLEEGVWPNAAPTDPFLSRPMRAALGLPPPERRLGQTAQD
FVQAACADEAILVHSERRGGQPAVKSRWLWRLEMLTRGADAPSTPVVLERPSDAVDLART
LDVPLPGPPRYARRPAPTPPVHRRPRQLPVTGIERWVRDPYAVYAQRILALQKLDRPGAS
AEAMARGNAVHRAIERVVVSWPDALPDDCADQIEGFLREELDAAGFEDHAMARETPLARN
CAVWLAGWERERRARGATLLIEQTGRMTFDAPFGPFTLTAKADRVELDAAGAAVIDFKTG
STPTARQVAQGFAPQLTLTAAILADGGFADAPPTPASELLYVKVTGRKTPGESVDVGKVG
RNQPLTAAELAGRELARLIDGVAAFDDEARPYVSWAAPQFMGNFGGNYDHLARVWEWHVV
GGEDEAPE
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccgcttcgatccgttccaaccggcagggccgcgctggtatgcgatcgaggcc
cgccgccccttccttgaggatctcgccgccggcgtgctcgactggctcggcgaccatccg
cccgagaccttgtccgacgccgtcatcctgctgcccaaccgccgcgcggcccgggccttc
accgccgccctgacgagacaggccggcgggcgggccatcctgctgccgcaggtccggccg
ctgggcgatctggaagaagacgagccgccgttcgcgccgggcgagctggggctcgacctg
cccccggccatcgcgcccctgacgcggcgattcgagatggcgcgaatgatcgtcgaggat
ttccgccccggcctgtcgcccctgcgcgccctggagatggccgacgcgctcggcggcttc
ctcgactcctgccagctggaggaggtcgaggacctgcatcgggtcgccaccctggtcgag
gaggatctggccgaacactggcgggagtccgccgagttcctcgccctcgccgtagaggcc
tggccgaagcgtcttgaggccatggggctggtcgatccggcctggcgtcgcgcccgcctg
ttgcgccttctggccaccgcctggaccgagcggccgccgacccagacggtcatcgccgcg
ggctcgaccggcaccgcccccgcggccgccgctgtgctggccgccgtcgcggccgcccca
cgcggttgcgtcgtcctgcccggcctcgaccgcgaactggatccggcggtctgggcaacg
ctgggcgataacgaacagcatccgcagaatgcgctctggcgactgctggacggtcgcgcg
gaacgcgaggaagtccggccatggttcgagcccgcagaggaccctgtgtcccgcaggcga
gaccgggcgcgtcagcggctgatcaacgaagccctgcgccccgccgacgcgaccgacgac
tggcgcacggttatcagcaccctgcgcaaggatgccttccgcgaacagtccgccgacccg
atcgcccagggtcttgagggtctgtccgtcgttaccgtccgggccgaggaggacgccgcc
gccgccctcgccctgatgatgcgcgagacgctggagacacccggaaagacctgcgccctc
gtcacccccgacctggcgctgggccggcgcgtcgccgcccggctcgagcgctgggggggc
gtcgccgacgtctcgtccggccagcccctgtcgcgcatggacgccggccggctgatcgat
ctcgcggtccgcttcgtggcgaaacccctcgacccccacgccctgctcggcctgctgaaa
caccccctggcccggctcgacctcggcgagaccgattccgccgtcgcgcggcaggcgctg
gagcaccacgccctgcgcggcccacgtcaccgtgactgggcccgtctgcggcgcgccctg
ctcaaggccggagagccccgcgacgacggcaaggcgccgtcggagggaacccgcgcccgc
ctggcggcggccacgaccctggtcgaccggctggagaccctgtccgccgccgccctcgcg
cccttcaccccggacgccccgctcgacgtcgctgcccgcggtctgacagaactgatcgag
gcgcttgccgggcaggatgcctgggccggtcccgacggagaggcggctgcggccctgctg
tccggcctgatcgagggcggggcgtcgctgggccccgtctcgcgcgccgaattcgccgac
ctgatccgcagcctgctggccgaagagaccgttcgtaccggcggggccaaccagccgcgc
ctgcgcattctcggtgcgatcgaggcccggctggtgcgggccgaccggatgattctggca
ggactggaagaaggcgtctggcccaatgccgccccgaccgatcccttcctgtcgcggccc
atgcgggcggccctcggcctgccgccgcccgagcgccgcctcggccagaccgcccaggac
ttcgtccaggccgcctgcgccgacgaggccatactggtccattccgagcgccgcggcggg
cagccggcggtcaagtcgcgctggctctggcggctggagatgctgacccgcggtgccgac
gccccgagcacgcctgtcgtgctcgagcggccgtcggacgccgtggatctggcccggacg
ctggatgtcccgctgccgggaccgccgcgctacgcccgccgtccggcgccgacgccgccc
gtgcatcgccgtccgcgccagttgccggtcaccgggatcgagcgctgggtgcgcgacccc
tatgccgtctatgcccaacgcattcttgctctgcagaagctcgaccgtccgggtgcctcg
gccgaggccatggcccgcggcaatgccgtccaccgggcgatcgaacgcgtcgtcgtcagc
tggcccgatgccttgcccgacgactgcgccgaccagatcgagggcttcctgcgcgaggag
ctggacgccgccggcttcgaggaccacgcgatggcccgggagacgccgctggcccgcaac
tgcgccgtctggctggccggctgggagcgcgagcgccgggcgcgcggggcgaccctgctg
atcgaacagacgggccggatgacgttcgacgccccgttcggccccttcaccctgaccgcc
aaggcggaccgggtcgaactcgacgccgccggagccgccgtgatcgacttcaagaccggc
tcgacccccacggccagacaggtcgcccaaggcttcgcgccccagctgaccctcaccgcc
gccatccttgccgacggcgggttcgccgacgccccgccgacgccggcgtccgaactgctc
tacgtcaaggtcaccggccgcaagacacccggcgagtcggtcgacgtgggcaaggtcggc
cgcaaccagcccctcaccgctgcggaactggccgggcgcgaactggcccggctgatcgac
ggcgtcgccgccttcgacgacgaggcccggccctatgtctcctgggccgcgccccagttc
atgggcaatttcggcggcaactacgaccatctggcccgggtctgggaatggcacgtcgtc
ggcggcgaggacgaggcccccgaatga
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