Aquidulcibacter paucihalophilus: KB221_04645
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Entry
KB221_04645 CDS
T09139
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
apah
Aquidulcibacter paucihalophilus
Brite
KEGG Orthology (KO) [BR:
apah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apah03021
]
KB221_04645 (rpoH)
Transcription machinery [BR:
apah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KB221_04645 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r3
HTH_3
HTH_11
GntR
HTH_19
DUF1870
DUF5401
LysM
DUF3431
Motif
Other DBs
NCBI-ProteinID:
WIY70322
LinkDB
All DBs
Position
complement(954146..955033)
Genome browser
AA seq
295 aa
AA seq
DB search
MAVTRSLAVMSPEQGLSRYLTEIRKFPMLAKDEEFMLAKRWTEHQDAESAHRLVTSHLRL
VAKIAMGYRGYGLPIGEVISEGNVGLMQAVKKFDPDKGFRLATYAMWWIRASIQEYILRS
WSLVKMGTTAAQKKLFFNLRKAKSQISAFEEGDLRPEHLSAIATKLGVSEEEVTNMNRRL
GGDASLNAPLRADGESEWQDWLADDTAVSQETQLAEDEEKSIRRGLLEEAMHELTDREKH
ILTERRLKDDPVTLEELAGQYGVSRERVRQIEVRAFEKLQKAMRAAAEERNLVDA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaccagatcactcgcggtgatgtcgcctgaacaggggctgtcgcgatacctg
acggaaatccgcaagttccccatgcttgcgaaagacgaagaattcatgctcgccaaacgc
tggaccgagcaccaggacgccgagagcgcccaccgccttgtgacatcgcacctgcgcctc
gtggccaagatcgccatgggttatcgcggctacggcctgccgatcggcgaggtgatctca
gagggcaacgtcggcctgatgcaggccgtcaagaaattcgatccggacaagggcttccgc
ctggcgacctacgccatgtggtggatccgcgcctcgatccaggaatacatcctgcgcagc
tggtcgctcgtgaagatgggcaccacggccgcgcagaagaagctgttcttcaacctgcgc
aaggccaagagccagatctcggccttcgaggaaggcgacctgcgtcccgaacacctctcg
gcgatcgccaccaagctgggcgtgtccgaggaagaggtcaccaacatgaaccgccgcctc
ggcggcgacgcctcactgaacgcgcccctgcgcgccgacggcgagagcgagtggcaggac
tggctggccgacgacacggcggtctcgcaggagacccagctcgccgaggacgaagagaaa
tcgatccgccgcggcctgctggaagaggccatgcatgagctgaccgaccgcgagaagcac
atcctcacggaacgccgcctgaaggacgatccggtcacgctcgaggaactcgccggccag
tacggcgtgtcccgcgaacgcgtgcgccagatcgaggtccgcgccttcgagaagctacag
aaggccatgcgcgccgccgccgaagagcggaacctggtcgacgcatag
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