Aquidulcibacter paucihalophilus: KB221_08730
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Entry
KB221_08730 CDS
T09139
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
apah
Aquidulcibacter paucihalophilus
Pathway
apah03030
DNA replication
apah03430
Mismatch repair
apah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KB221_08730 (dnaE)
03430 Mismatch repair
KB221_08730 (dnaE)
03440 Homologous recombination
KB221_08730 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apah03032
]
KB221_08730 (dnaE)
03400 DNA repair and recombination proteins [BR:
apah03400
]
KB221_08730 (dnaE)
Enzymes [BR:
apah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KB221_08730 (dnaE)
DNA replication proteins [BR:
apah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KB221_08730 (dnaE)
DNA repair and recombination proteins [BR:
apah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KB221_08730 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
WIY68189
LinkDB
All DBs
Position
complement(1802645..1806127)
Genome browser
AA seq
1160 aa
AA seq
DB search
MGQLKEGLAISTAATAAQFIHLRVRSAYSLLEGAIKAGKVATLAADAGMPAVGVADRANL
FGALEFSEAAKGSGVQPIVACALPVTGIGGKINERWARVPTVVLAVQNDAGWLNLCALSS
SAFLDAGSMDEPSVPWSMVAERSEGLILLSGGPDGPVDPLFVQGKAAEANAALDEMARVF
GDRLYIELQRHGLAGERQAERGLVEWAYAHDVPLVATNDVHYAKAAQAKSHDALMCIADG
AFTGQEDRRRVTGEHWFKPAAAMRELFSDLPEACDTTVEIARRCAFLVPTRAPILPRFEA
GAGRTEPDELMHQAREGLKARLLAVTPAAPESEYWTRLEWEVGIIQQMGFPGYFLIVSDF
IKWAKNHGIPVGPGRGSGAGSLVAWALTITDLDPLRFGLLFERFLNPERVSMPDFDIDFC
QERREEVIDYVQDRYGKDRVAQIITFGTLQARAVLRDVGRVLQMPLGQVDRLAKMVPANP
ANPVTLAQAIEIEPRLKEARDSEAAVRTLLDTALELEGLYRNASTHAAGIVIGDRPLTEL
VPLYQDPRSTIPASQFNMKWVEAAGLVKFDFLGLKTLTVLDRARIYLERRGAAVDWNSLP
LDDPKTYELMASGQTVGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPMEMIDTYI
DRKFGRQDVDCLHPSLVDVLTETYGVIIYQEQVMKIAQVLAGYSLGEADLLRRAMGKKKK
EEMDFQRARFVAGASEKGVSEEQSGFIFDLVAKFAGYGFNKSHAAAYALISFQTGWLKAN
HPVEFMAASMSLDLSNTDKLAVFYQDCRRFEVPIKGPDVNRSSADFDVAWDDGKGAVLYA
LGAIRNVGLEAMKHLVEVRETGGRFTDIFDFLERVDPRSVNKRALENLARAGAFDSFHSN
RRQLVEQADTLMAYCQSVAAERASSQVSLFGGDQAGAARPRLRPVEPWVGPEKLDQELAA
VGFYLSGHPLEDMAPALKRKRVTFVAEATALAESGHEAFLMAGVVRRRQERASAKSGEKF
AFVTFSDPTGEFECLFPPEQLRKCREVLEVGASIMVRVRAKSADGEVRFFGDDASRLDTL
IDDGAMGLRIHVSARGVDPEALKSRLERARAQGKGGEVSLIASLDGRREVELKLPGRYRL
DGALRGALKSAPGVVLLEDA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgggccagctcaaagagggtctggccatctcaaccgccgctacagccgcgcaattcatc
cacctgagggtccgctcggcctattcgctgctggaaggcgcgatcaaggcgggcaaggtc
gcgaccctggcggcggatgcgggcatgccggcggtgggtgtggcggaccgggccaatctg
ttcggggcgctggagttctccgaggcggcgaagggatcaggcgttcagccgatcgtggcc
tgcgccctgccggtgaccggcatcggtggcaagatcaacgaacgctgggcccgggtcccg
accgtggtgttggccgtccagaatgacgccggctggctgaacctttgcgccctgtcttcg
tcggccttccttgatgcggggtcgatggatgaaccgagcgtaccgtggtcgatggtggcg
gagcggtccgaaggcctgatcctgctctccggcggaccagacgggccggtcgatcccctg
ttcgtgcagggcaaggcggcggaggccaatgccgcgctcgacgagatggcgcgggtcttc
ggcgaccggctctatatcgagttgcaacgccacggcctcgccggcgagcggcaggccgag
cggggactggtcgaatgggcctacgcccatgacgtcccgctggtcgccaccaatgacgtc
cactacgccaaggccgcccaggcgaaatcgcacgacgccctgatgtgcatcgcggacggt
gccttcacggggcaggaggaccgtcgccgcgtcacgggcgaacactggttcaaaccggcg
gcggccatgcgggagctgttcagcgacctgcccgaagcctgcgatacgacggtggagatc
gcccgccgctgcgccttcctggttcccacgcgggcacccatcctgccgcggttcgaggcc
ggggccgggcggaccgagcccgacgaactgatgcatcaggcccgtgaagggctgaaggcc
cggttgctggccgtgacccccgccgcgccggagtccgaatactggacccgcctcgagtgg
gaggtcgggatcatccagcagatgggcttccccggctatttcctgatcgtgtcggacttc
atcaaatgggccaagaaccacggcattcccgtgggcccggggcggggctcgggtgctggg
tcgctggtcgcctgggccctgaccatcactgatctcgacccgctgcggttcggcctgctg
ttcgagcggttcctgaaccccgaacgcgtctccatgcccgacttcgacatcgacttctgc
caggagcggcgggaagaggtgatcgactacgtccaggaccgctacggcaaggaccgggtg
gcccagatcatcaccttcggcaccctgcaggcgcgggccgtgctgcgcgacgtcggccgg
gtgctgcagatgccgctgggacaggtggaccggctggccaagatggtgccggccaacccc
gccaatccggtgaccctggcccaggccatcgagatcgagccgcggctcaaggaggcgcgc
gattccgaggcggcggtgcgcaccctgctggatacggcgctggagctggaggggctgtat
cgcaacgcctcgacccacgccgccggcatcgtcatcggcgaccggcccctgaccgaactg
gtgcccctgtaccaggatccgcgttcgaccatcccggccagccagttcaacatgaaatgg
gtcgaggccgccggtctggtgaagttcgacttcctcggcctgaagaccctgaccgtgctg
gaccgcgcccggatctatctggagcggcgcggcgcggcggttgactggaacagcctgccg
ctggacgaccccaagacctatgagctgatggcctcgggccagaccgtcggggtgttccag
ctggaatcccagggcatgcgcgacaccctgcgcaagatgcggtgtggctccatcgaggaa
atcaccgccctgatctcgctctaccggcccgggccgatggagatgatcgacacctatatc
gaccggaaattcggccggcaggacgtcgactgcctgcacccgtccctggtcgatgtcctg
accgagacctacggcgtcatcatctaccaggagcaggtgatgaagatcgcccaggtcctg
gccggctattcgctgggcgaggccgacctgctgcgccgggccatgggcaagaagaagaag
gaggagatggacttccagcgcgcgcgcttcgtggcgggcgcgtcggagaagggcgtgtcg
gaggaacagtccggcttcatcttcgatctggtggccaaattcgcgggctacggcttcaac
aagtcgcacgccgctgcctatgcgctgatcagtttccagaccggctggcttaaggccaac
caccccgtcgaattcatggccgcgtccatgtctctcgatctcagtaataccgacaaactc
gctgtcttctatcaggattgtcgtcgctttgaggtgcccatcaagggcccggacgtgaac
cgctcctcggccgatttcgacgtggcgtgggacgatggaaagggcgccgttctctacgcg
ctgggtgccatccgcaacgtcgggctggaggcgatgaagcatctggttgaggtgcgcgag
accggcgggcggttcaccgacatcttcgacttcctggaacgggtcgatccgcgcagcgtc
aacaagcgggcgctggagaacctcgcccgcgccggggccttcgacagtttccactccaac
cgtcgtcagctggtcgaacaagccgacaccctgatggcctattgccagagcgtggccgcc
gagcgggcctcatcgcaagtgtcgctgttcggcggcgaccaggccggggcggcgcggccg
cggctgaggccggtcgagccctgggtcgggcccgagaagctggaccaggaactggccgcc
gtcggattctatctgtccggccacccgctggaggacatggcccctgcactgaagcgcaag
cgggtcaccttcgtcgccgaggccacggccctggccgagagtggtcacgaggccttcctg
atggccggcgtcgtccgccgtcgtcaggagcgggccagtgccaagtcgggcgagaaattc
gccttcgtcaccttctcggacccgaccggcgagttcgaatgcctgttcccgcccgaacag
ctgcgcaaatgccgcgaagtgctggaggtcggggcctcgatcatggtgcgggtgcgggcc
aagtcggcggacggcgaggtccgcttcttcggtgacgatgcatcgcggctggacacgctg
atcgacgacggggcgatgggcttgcggatccatgtctcggcccggggcgtcgatccggag
gccctgaagtcgcggctcgagcgggcgcgggcgcagggcaagggcggggaggtgtcgttg
atcgcctcactggacggccggcgcgaggtcgagctgaaactgccgggccgctaccggctg
gacggtgccctgcgcggggcgctgaaatcggcaccgggtgtggtgctgctcgaggatgcc
tga
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