Aquidulcibacter paucihalophilus: KB221_09745
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Entry
KB221_09745 CDS
T09139
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
apah
Aquidulcibacter paucihalophilus
Brite
KEGG Orthology (KO) [BR:
apah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apah03016
]
KB221_09745 (rnd)
Enzymes [BR:
apah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KB221_09745 (rnd)
Transfer RNA biogenesis [BR:
apah03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KB221_09745 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Val_tRNA-synt_C
Motif
Other DBs
NCBI-ProteinID:
WIY68382
LinkDB
All DBs
Position
complement(1994248..1995396)
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AA seq
382 aa
AA seq
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MTPITTTEALRAFCERLADQPFITVDTEFMRETTYWPRLCLIQAASATDAAIIDPMAEGL
DLEPFLDLLRDPKIIKVFHAARQDTEIFVKLGAMPKPMFDTQVAAMAAGFGDQVSYEALV
RQMLRQEVDKGSRFTDWARRPLSEAQLVYALGDVTHLAALYPKLRDRLQKEGRLDWVMAE
MEDLTDPALYDTDPEKAWKRLKPKKWSAKYLAAFVATAVWRERTAQDRDQPRGRILKDEA
IDEIAAQAPTDPDAFNRLRSVPKGFGASRLGLELSAELKRVLADPEAHAPKLDRPAHNQP
APPSVVELLKVLLKAKSDNAGVATKLIANVADLEKIALDDAADIDALKGWRRQLFGEDAL
KLKRGEIALVLNGARVEVVEIE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgatcaccaccaccgaggcgcttcgcgcattctgcgaacgcctggccgaccag
cccttcatcaccgtcgacaccgagttcatgcgggagacgacctattggccgcgcctgtgc
ctgatccaggccgcgtcggccacggacgccgccatcattgacccgatggccgagggactg
gacctcgagcccttcctcgacctgctgcgcgacccgaagatcatcaaggtcttccatgcg
gcgcgtcaggacaccgaaatcttcgtcaagctgggcgccatgcccaagccgatgttcgac
acccaggtcgccgccatggccgccggtttcggcgaccaggtgtcctatgaggcgctggtc
cgccagatgctgcgccaggaagtcgacaagggcagccggttcaccgactgggcccgccgg
cccctgtcggaggcccagctggtctatgcgctgggcgatgtgacccatctggccgccctg
tatcccaagctgcgcgaccggctgcagaaggaaggccggctcgactgggtcatggccgag
atggaggatctgaccgatccggccctctacgacaccgacccggaaaaggcgtggaagcgg
ctgaagcccaagaaatggtcggccaaatacctcgccgccttcgtcgccaccgccgtctgg
cgcgagcgcacggcgcaggaccgcgaccagccgcgcgggcgaatcctcaaggacgaggcc
attgacgagatcgcggcccaggccccgaccgatccggatgccttcaaccgcctgcgctcc
gtgcccaagggcttcggcgcctcgcgcctcgggctggagctgtcggccgagctgaagcgg
gtgctggcggatccggaggcccatgcgcccaagctggaccgtccggcccacaaccagcct
gccccgccgtcggtggtggaactgctgaaggtgctgctgaaggcgaagagcgacaatgcc
ggggtggcgaccaagctgatcgccaacgtcgctgatctggaaaagatcgccctcgacgac
gccgccgacatcgacgccctcaagggctggcggcgtcagctgttcggcgaggatgcgctg
aagctcaaacgcggcgagatcgccctggtgctgaacggcgcccgcgtcgaggtcgtcgag
atcgaatag
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