Aquidulcibacter paucihalophilus: KB221_10085
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Entry
KB221_10085 CDS
T09139
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
apah
Aquidulcibacter paucihalophilus
Pathway
apah03410
Base excision repair
apah03430
Mismatch repair
apah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KB221_10085 (recJ)
03430 Mismatch repair
KB221_10085 (recJ)
03440 Homologous recombination
KB221_10085 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apah03400
]
KB221_10085 (recJ)
DNA repair and recombination proteins [BR:
apah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KB221_10085 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KB221_10085 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KB221_10085 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-ProteinID:
WIY68445
LinkDB
All DBs
Position
complement(2058079..2059881)
Genome browser
AA seq
600 aa
AA seq
DB search
MADGGAVPAFLGVSRSLSGREWRQRPAEAGLIRAHMQTLNLEEPLARALAARGVRADRGA
DFLTPTLKALFPDPSSFMDMDAAAEAILDALQARASIHVFADYDVDGASSAALLVRWFRA
LGAELPIYVPDRVTEGYGPSARAFDTLKASGADLVITVDCGAAANEAVAHAAAIGLKVVV
IDHHMMREHPPVCAAVVNPNRPGCNSGQGNLAAAGVVFVLLAALNREARRRGMFADVKEP
DIRQWLDLAAMGAICDVTGLTGFNRALTSLGLRVMSDWGNPGLRALLAAAGAEPGPAKSN
HAGFILGPRINAGGRIGKSDLGARLLSTDDPVEAAALAQELDALNIARREVEKQVTDQAT
RMVEATGAHADGSAVVVIAGDEWHPGVVGIVAGRLRERWRKPVVVIGVDAVNGLGKGSGR
SQPGMNLGKAVQAAWESGVLIAGGGHAMAAGLTVRADDIDRLRDFLNDRMIGEQAAADAL
DHVEIDALIDPGAATRALFEQFEQLAPFGPANPEPLFALEHVQARDAVAMNGGHVRCRLV
GADGASVKAIAWRCADLPGGQSLLAGQGGLSVVGRLKVDDWNGRRGVQFEIEDVADPRMA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcggcgccgttccagccttcctgggcgtctcccgctccctgtccggccgc
gaatggcggcagaggcccgccgaggccgggctgatccgggcccatatgcagacgctgaac
ctggaagagccgctggcgcgggcgctggcggcgcgcggcgtgcgggcggaccggggcgcg
gacttcctgacgccgacgctgaaggccctgttccccgacccgtccagcttcatggacatg
gatgcagcggccgaggcgatcctcgacgccctccaggcgcgtgcctcgatccacgtcttc
gccgactatgatgtcgacggggcgtccagcgcggccctgctggtgcggtggttccgggcg
ctgggtgccgagctgccgatctatgtgccggaccgcgtgacggaggggtacggacccagc
gcgcgggccttcgacacactgaaggcctcgggtgccgatctggtcatcacggtcgattgc
ggcgcggcggccaatgaggccgtggcccatgcggcggcgatcgggctgaaggtcgtggtc
atcgaccaccacatgatgcgcgaacatccgcccgtctgcgccgctgtggtcaatccgaac
cggcccggctgcaactcggggcagggcaatctggccgcggcgggggtggtgttcgtcctt
ctggcggcgctgaaccgcgaggcgcgtcggcgcgggatgtttgcggacgtcaaggagccg
gacatccgccagtggctggatctggccgccatgggcgcgatctgcgacgtcaccggcctg
accgggttcaaccgggccctgaccagtctggggctgcgggtcatgtcggactggggcaat
ccggggctgagggccctgctggcggcagcgggcgccgagccggggccggccaagtcgaac
catgcgggcttcatcctcggaccacgcatcaatgccggcggacggatcggcaagtcggac
ctcggggcgcgcctgctgtcgaccgacgaccccgtcgaggccgcggcgctggcgcaggaa
ctggatgccctgaacatcgcccgccgtgaggtggagaaacaggtcaccgatcaggccacc
cgcatggtcgaggcgaccggtgcccatgccgacggctcggctgtcgtggtgatcgcgggc
gacgaatggcatccgggcgtggtcggcatcgtggcgggccgcctgcgcgaacgctggcgc
aagcctgtggtggtgatcggcgtcgatgcggtgaatggcctcggcaagggctcggggcga
tcgcagcccgggatgaacctcggcaaggcggtgcaggcggcctgggaaagcggcgtgctg
atcgccggcggcggccacgccatggcggcggggctgacggtccgcgccgacgacatcgac
cggctccgcgactttctcaatgaccggatgattggcgagcaggcggccgccgacgccctc
gaccacgtcgagatcgacgccctgatcgatccgggcgcggccacgcgcgccctgttcgaa
cagttcgagcaactggcccccttcggcccggccaatcccgagccgttgttcgcccttgaa
catgtgcaggcgcgcgacgccgtggccatgaacggcggccatgtgcgctgccggctggtc
ggggccgacggtgcttcggtcaaggccatcgcctggcgctgcgccgacctgcccggcggc
cagtcgctgctggcagggcagggcggactgagcgtggtcggacgtctgaaggtcgatgac
tggaacggtcgccgcggcgtccaattcgagatcgaggacgtggccgatccgcggatggcg
taa
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