Aquidulcibacter paucihalophilus: KB221_12195
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Entry
KB221_12195 CDS
T09139
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
apah
Aquidulcibacter paucihalophilus
Pathway
apah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KB221_12195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apah03400
]
KB221_12195
Enzymes [BR:
apah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KB221_12195
DNA repair and recombination proteins [BR:
apah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KB221_12195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
WIY68838
LinkDB
All DBs
Position
complement(2496790..2498220)
Genome browser
AA seq
476 aa
AA seq
DB search
MRVATLAGETDFDGWRAGARAFRQAGVAPGEAVFRVGGSGPGLFDDGLPALTPDTGFHTA
RAFVDLAQSVILHRSGDRFDLLYRLLWRLKAEPDLIRVVTDVDVADAMERAKNVSRASHK
MKAFVRFRRIDAADGERWAAWFEPAHRVLERTAPFFARRFANMHWTILTPDGSAIWDGDT
LAFGPPATRDMAPGEDEVEDFWKTYYASTFNPARLKLKTMQGEMPKRYWKNLPEAALIHQ
LTAQSLARTETMVAAPASEPNARLAKTLSRINRDHAFDEGFVPSSLEELGQAVQACRRCP
LWRDATQGVCGTGLKAAPLMIVGEQPGDQEDLSGRPFVGPAGQLLDEALVEAGIRREDAF
VTNAVKHFKHEPRGKRRIHKTPLASEISACRWWLDAERRLVKPKVIVTLGTTAALGVLNR
KIALMQERGQPMHQAGGARVVATVHPAYLLRLTDEAARIEERGRFVADLKRIRALL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgcgaccctggccggggaaaccgatttcgatggctggcgggccggcgcgcgg
gcgttccgtcaggcgggcgttgcgccgggggaggcggttttccgggtcgggggaagcggg
ccgggtctgttcgacgacggtctgcctgcactgacgccggacaccggctttcacacggcg
cgcgccttcgtcgatctggcgcagtcggtgatcctgcatcgctccggggaccggtttgat
ctgctgtaccgcttgctctggcggttgaaggccgaacccgacctgatccgggtcgtgacc
gacgtcgatgtggccgatgccatggaacgcgccaaaaacgtcagccgcgccagccacaag
atgaaggccttcgtccgcttccggcggattgatgcggcggacggggagcggtgggcggcg
tggttcgagcccgcacatcgggtgctggaacgcacggcacccttcttcgcccgccggttt
gccaacatgcactggaccatcctcacgccggacgggtcagcgatctgggacggggatacg
ctggcgttcggtccgccggcgacccgcgacatggctccgggcgaggatgaggtcgaggac
ttctggaagacctactacgcctcgaccttcaatccggcgcgcctgaagctgaagaccatg
cagggcgagatgcccaaacgctactggaagaacctgcccgaggcggcgctgatccatcag
ctgacggcgcaatcattggcccgcaccgagacaatggtcgcggcaccggcgtcggaaccc
aacgcccggcttgcgaagaccctgtcccggatcaatcgcgaccacgccttcgacgaaggg
ttcgtcccgtcgtcgctggaagaactcggacaggcggtccaggcctgccgccgatgcccc
ctgtggcgggatgcgacccagggcgtctgcggcaccggcttgaaagccgcgcccttgatg
atcgtcggcgaacagccgggcgaccaggaagatctgtccggtcgtcccttcgtcgggccg
gcgggacagttgctggatgaggcgctggtggaggcgggcatccggcgggaggacgccttc
gtcaccaatgcggtgaagcatttcaagcatgagccgcgcggcaagcggcgcatccacaag
accccgctcgccagcgagatcagcgcctgccgctggtggctggacgcggagcgccggctg
gtgaagccgaaggtgatcgtgacgctgggaaccacggcggccctcggggtcctgaaccgg
aaaatcgccctcatgcaggaacgcggacagccgatgcatcaggccggtggagcccgggtc
gtggcgaccgtgcatcccgcctacctcctccgcctgacggatgaagccgcccggattgag
gaacgtggccgcttcgttgcggacctgaagcgcatccgggcactgctttga
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