Aquidulcibacter paucihalophilus: KB221_13890
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Entry
KB221_13890 CDS
T09139
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
apah
Aquidulcibacter paucihalophilus
Pathway
apah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KB221_13890 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apah03400
]
KB221_13890 (ruvB)
Enzymes [BR:
apah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KB221_13890 (ruvB)
DNA repair and recombination proteins [BR:
apah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KB221_13890 (ruvB)
RecFOR pathway proteins
KB221_13890 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_22
AAA_3
DUF815
AAA_2
AAA_18
nSTAND3
AAA_14
AAA_17
Rad17
AAA_33
NTPase_1
AAA_24
TsaE
ABC_tran
NB-ARC
AAA_28
RNA_helicase
NACHT
IstB_IS21
AAA_25
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WIY69152
LinkDB
All DBs
Position
complement(2820236..2821270)
Genome browser
AA seq
344 aa
AA seq
DB search
MSEDRIISGDPAPGEGHDRALRPQTLSEFVGQEQAKGNLKVFIDAARGRGESLDHVLLFG
PPGLGKTTLAQIVARELGVGFRATSGPILAKAGDLAAILTNLEPRDVLFIDEIHRLAPTV
EEILYPAMEDHVLDLIIGEGPSARSVRIDLAPFTLVGATTRAGLLATPLRDRFGIPLRLE
FYTPEELVRVITGAARKLGVGINDEGAREIASRSRGTPRVAGRLLRRVRDFAEAEGSPVI
DRLAAARALARLEVDEAGLDSLDRRFLKALIENYGGGPVGMDTLAAAIAEARDAVEDVIE
PYLLQQGFIQRTPRGRMACARAYAHLGLAEPPKPAGAGQTALFE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaggaccggatcatctcgggggaccccgcgccgggcgaaggccacgaccgcgcc
ctgcggccgcagaccctgtcggagttcgtcggccaggagcaggccaagggcaatctcaag
gtcttcatcgacgcggcgcgggggcgcggcgagtcgctggaccatgtcctgctgttcggc
ccgccggggctgggcaagacaacgctggcgcagatcgtggcgcgggagctcggcgtgggg
ttccgggccacctcggggccgattctcgccaaggccggcgatctggcggccatactgacc
aatctcgaaccgcgcgacgtgctgttcatcgacgagatccaccgcctggcgccgacggtc
gaggagatcctctatcccgccatggaggaccatgtactggacctgatcatcggcgagggc
ccgtcggcgcggtcggtgcggatcgatctggcgcccttcaccctcgtcggggcgacgacg
cgggcggggctgctggccacgccgctgcgggaccggttcggcattccgctgcggctggag
ttctacacgcccgaggagctggtccgggtgatcaccggggcggcccgcaagctgggtgtc
ggcatcaatgacgagggcgcgcgcgagatcgccagccgctcgcggggcacgccgcgcgtg
gccggtcggctgctgcgccgggtgcgcgacttcgccgaggcagaagggtcgccggtgatc
gaccggctggcggcggcgcgggcgctggcgcggctggaggtggacgaggcggggctggac
agcctcgaccgccgcttcctgaaggccctgatcgaaaactacggcggcgggccggtcgga
atggatacgctggcggcggccatcgccgaggcgcgcgatgccgtcgaggatgtgatcgaa
ccctatctgctgcagcagggcttcatccagcgcaccccaaggggacggatggcctgtgca
cgcgcctacgcccacctcggccttgccgagccgccgaagccggcgggggcggggcagacc
gccctgttcgaatag
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integrated database retrieval system
