KEGG   Aquidulcibacter paucihalophilus: KB221_14930
Entry
KB221_14930       CDS       T09139                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
apah  Aquidulcibacter paucihalophilus
Brite
KEGG Orthology (KO) [BR:apah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apah03400]
    KB221_14930
Enzymes [BR:apah01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KB221_14930
    5.6.2.6  RNA 3'-5' helicase
     KB221_14930
DNA repair and recombination proteins [BR:apah03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KB221_14930
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII
Other DBs
NCBI-ProteinID: WIY70945
LinkDB
Position
complement(3014024..3016459)
AA seq 811 aa
MIAAAEAGSHALLVAPTGGGKTLAGFLPSLVELAERGPRPAFGPGSGVHTLYLSPLKALT
TDVERNLMTPIREIGLNIHVESRTGDTKQSKKQRQRENPPDILLTTPEQLALFCAWDGAR
DYFADLKCVVLDEVHAIWSGKRGDLLSLGLGRLQQFAPDMRRVALSATVDDPEMIADWLR
PGVDAPVTIVRGDPGAPPVVDVLVSEGRVPWAGHTGQHAIPEVYEALKRSGMTLIFVNTR
WQAEFVFQSLWAINEDDLPIALHHGSLAAEQRRKVEAAMARGELRAVVCTSTLDLGIDWG
DVDLVIQLAAPKGASRLVQRIGRANHRLDEPSRALMVPASRFEMLECQAAREAVAENAFD
WEPVHTGTLDTLAQHVMGCACSEPFALDDLYAEITGCGPYRGLSYEQFEEVVDLVATGGY
ALRTYERFARIVRTQDGRWTVRNAQTAQRHRMNVGTIVAAATLNVRIASRRGGASKQLIG
GRKVGEAEENYFEQMSPGDTFVFAGQVWAFQGINGMDALVTHAQDKDPKIPSWGGNKFPM
STSLASRVRAMIQDRDHWRILPPDVQEWLELQEARSVIPDAETLLVETFPRGSRHFLVAY
PFEGGLAHATLCMLLTRRLDRLGVGPLGFVCTDYSLAIWSIKPMDGLDLGALFEPDMLGD
DLESWLAESFMMKRTFRNCALISGLIEKRQPGNEKTGRQVTFSTDLIYDVLRRHQPDHLL
LKTARADAAAGLLDVARLGQLLERIRGQIKHVPLERPSPFCVPVLVQIGRERVGGGQAAE
MILDASAYGFDEETLIAEVMADAPPELAGAE
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgatcgcggcggcggaggccgggtcgcatgcgctgctcgtagcgccgaccgggggcggc
aagacgctggcggggtttctgccgtcgctggtggagctggcggaacgcgggccgcggccg
gcgttcgggccggggtccggggtgcacaccctctatctgtcgccgctgaaggccctgacc
accgacgtcgagcgcaacctgatgacgccgatccgcgagatcgggctgaacatccatgtc
gagagccgcaccggcgacaccaaacagtccaagaagcagcggcagcgggaaaacccgccg
gacattctgctgaccacccccgaacagctggccctcttctgcgcctgggacggcgcgcgc
gactatttcgccgacctgaaatgcgtcgtgctggacgaggttcatgcgatctggagcggc
aagcggggggacctgctgtcgctgggactggggcggctgcaacagttcgcgccggatatg
cggcgggtggcgctgagcgcgaccgtggacgatccggagatgatcgcggactggctgagg
cccggtgtggatgcccccgtcaccatcgtccgcggcgaccccggcgcgccgccggtggtc
gatgtgctggtcagcgagggcagggtgccgtgggccggccacaccggccagcacgccatc
cccgaggtctatgaggcgctgaagcgctcggggatgaccctgatcttcgtcaacacgcgc
tggcaggcggagttcgtcttccagtcgctgtgggcgatcaatgaggacgacctgccgatc
gccctgcaccacggctcgctggcggccgagcagcggcgcaaggtcgaggcggcgatggcg
cgtggcgagctcagggccgtggtctgcacctcgacgctcgacctcggcatcgactggggc
gacgtcgatctggtgatccagctggccgcgcccaagggcgcctcgcggctggtgcagcgg
atcggccgggccaatcaccggctggacgagccgtcgcgcgccctgatggttcccgccagc
cggttcgagatgctggaatgccaggccgcgcgcgaggcggtggccgagaacgccttcgac
tgggagccggtgcatacgggtacgctcgacaccctggcccagcacgtcatgggctgcgcc
tgctccgaacccttcgcgctggatgatctgtatgcggaaataaccggctgcggcccctat
cgcgggctgtcgtacgagcagttcgaggaggtggtcgatctggtcgcgaccggcggctat
gccctgcgcacctatgagcggttcgcgcggatcgtgcggacgcaggacggcagatggacc
gtccgcaacgcccagacggcccagcgccaccggatgaatgtcgggaccatcgtggccgcc
gcgaccctgaacgtgcgcatcgcctcgcggcgcggcggggcctcgaaacagctgatcggc
ggccgcaaggtcggcgaggctgaggagaactatttcgaacagatgtcgcccggcgacact
ttcgtcttcgccggtcaggtctgggccttccagggcatcaacggcatggacgccctggtc
acccatgcccaggacaaggatcccaagatcccgtcctggggcggcaacaagtttccgatg
tcgacctccctggccagccgggtgcgggccatgatccaggaccgcgatcactggcgcatc
ctgccgcccgatgtgcaggaatggctggagctgcaggaggcgcggtcggtcatcccggat
gcggaaaccctgctggtcgagaccttcccgcggggttcgcggcatttcctcgtggcctat
ccgttcgagggcggactggcgcatgcgaccctgtgcatgctgctgacgcggcggctggac
cggctgggcgtcggaccgctgggcttcgtctgcaccgactattccctggccatctggtcg
atcaagccgatggacgggctggatctcggtgccctgttcgagcccgacatgctgggcgac
gatctggaaagctggctggccgagagcttcatgatgaagcggacgttccgcaattgcgcc
ctgatctcggggctgatcgagaagcgccagccgggcaatgagaagaccggccggcaggtg
accttctcgacggacctgatctacgacgtgctgcgccgccaccagcccgaccacctgctg
ctcaagaccgcccgcgccgatgcggccgcgggcctgctggacgtggcgcgtctgggccag
ctgctggagcggatccggggccagatcaaacatgtgccgctggagcggccttcgcctttc
tgcgtgccggtgctggtccagatcgggcgcgagcgggtcggcggcgggcaggcggcggag
atgatcctcgacgccagcgcctatggattcgacgaggagacgctgatcgccgaggtgatg
gcggacgcgccgcccgagctggcgggggcggaatga

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