Aquidulcibacter paucihalophilus: KB221_15275
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Entry
KB221_15275 CDS
T09139
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
apah
Aquidulcibacter paucihalophilus
Brite
KEGG Orthology (KO) [BR:
apah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apah03016
]
KB221_15275 (truB)
Enzymes [BR:
apah01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KB221_15275 (truB)
Transfer RNA biogenesis [BR:
apah03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KB221_15275 (truB)
Prokaryotic type
KB221_15275 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WIY69410
LinkDB
All DBs
Position
3076248..3077180
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AA seq
310 aa
AA seq
DB search
MGRRKKGEIVNGWVCLDKPFGMGSTEAVSKVRRLFDAQKAGHAGTLDPLASGILPIALGE
ATKTVPFMMEAQKVYRFTINWGISTDSLDREGEITGRSDVRPDIEAVRAALPAFVGEIDQ
IPPQFSAIKVDGQRAYDLAREGTDFELASRRVTIHEASVSDAPDPDHVELVIRTGKGVYV
RSLARDLAAALGAEGHVSALRRERVGPFSTENAVSLDFLTDLVHRDAASEGLLPVATALD
DIPELAVTDQDAFSLRQGRPIVLLPGQVETLKSRLRDGSRTVSAFQGQTLVALGQLRAGR
LEPDRVFNLL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccgcaagaagggcgagatcgtcaacggctgggtctgtctcgacaagccgttc
ggcatgggctccaccgaggccgtctccaaggtccgccgcctgtttgatgcccagaaggcc
gggcacgccggcacgctggatccgctggcctccggcatcttgcccatcgccctcggcgag
gcgaccaagaccgtccccttcatgatggaggcgcagaaggtctatcgcttcaccatcaac
tgggggatttcgactgacagcctcgaccgcgagggtgagatcaccggccgctcggacgtc
cgccccgatatcgaggccgtgcgcgcggcccttcccgcctttgtcggtgagatcgatcag
atcccgccgcagttcagcgccatcaaggtcgacggccagcgcgcctatgacctggcccgc
gaaggcaccgatttcgaactggccagccgccgggtgacgatccacgaggcctcggtcagc
gatgcgcccgaccccgaccacgtcgagttggtcatccggacaggcaagggcgtctatgtg
cgctcgctggcgcgcgatctggccgccgctctcggggccgaggggcatgtttccgccctg
cgccgcgagcgggtcggaccgttctcgacggaaaacgccgtatcgctggatttcctgacc
gatctggtgcatagggacgccgcctcggaaggcttgcttcccgttgcgaccgccctggac
gacatcccggagctggccgtgacggaccaggacgccttctcgcttcgtcagggacgaccg
atcgttctgctccccggacaggtcgaaacgctcaagagccgccttcgggacggctcccga
accgtttcagcctttcagggtcagaccctcgtcgctctcggtcagttgcgggccggccgg
ctagaacccgaccgcgtttttaacctcctttag
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