Malaciobacter pacificus: APAC_0064
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Entry
APAC_0064 CDS
T06712
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
apai
Malaciobacter pacificus
Pathway
apai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APAC_0064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apai03019
]
APAC_0064
03009 Ribosome biogenesis [BR:
apai03009
]
APAC_0064
Enzymes [BR:
apai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
APAC_0064
Messenger RNA biogenesis [BR:
apai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
APAC_0064
Ribosome biogenesis [BR:
apai03009
]
Prokaryotic type
rRNA helicases
APAC_0064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QEP33235
UniProt:
A0A5C2H6Y2
LinkDB
All DBs
Position
65881..67386
Genome browser
AA seq
501 aa
AA seq
DB search
MTFNEFNFKTQLQKAIDDAGFKEPSPIQADAIPIILEGKDIVGQAHTGTGKTAAFGLPIL
NKLECNGDVEAVVIVPTRELAMQVSDEIFRFGKFLKINTATVYGGQSYSRQLKHIDNASV
IVATPGRFLDLLRDGKINIAPKYVILDEADEMLDMGFLDDIKEIFTFMPNERQTLLFSAT
MPPAIKKLAQTILVEPEFITITKSDVTNSKITQTFYVVEEKERDDALIRLYDFKNPEKSI
IFCRTKKEVDRLSTFLVSQGFMAKGLHGDMEQRQREEAIRAFKTSKLEILIATDVAARGL
DVNDVTHVFNYHLPFDSESYVHRIGRTGRAGKEGMAVSIVTPHEFRMLQKIEKNIGTKLE
GRSVPNISSVKEKKVTDLMNKIKEQDIQDYALALVEELKEEYDISTIAYKLASMISSSTY
VKGNNKIGKSEQDIQRLIENANKYGDSNGRDRNRGGRGRGSRGGSRYGGSRNRNDRSSDR
ERSGGDSRRRNRSGDSRRRRD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacattcaatgaatttaatttcaaaacacaattacaaaaagcgatagatgatgctggt
tttaaagagccaagtcctattcaagcagacgcaattcctattattttagagggaaaagat
attgttggtcaagcacatacaggtacaggtaaaacagcggcatttggacttccaatttta
aataagttagagtgtaacggtgatgtagaagcagtagttattgtaccaacaagagaactt
gcgatgcaagtatctgatgagatttttagatttggaaaatttcttaaaatcaatacagca
actgtatatggtggacaatcatattcaagacaattaaaacatattgataatgcatcagta
attgttgcaactccaggtagattcttagacttactaagagatggaaaaatcaatattgca
cctaaatatgtgattttagatgaagcagatgaaatgcttgatatgggatttttagatgat
attaaagaaatctttacttttatgccaaatgaaagacaaactctattattctcagcaact
atgcctcctgctattaaaaagttagcacaaacaattttagtagagccagaatttattaca
atcacaaaaagtgatgttacaaactctaaaattactcaaactttctacgtagtagaagaa
aaagagagagatgatgctttaattagattatatgattttaaaaacccagaaaagtcaatc
attttttgtagaacaaaaaaagaagttgatagattatcaactttcttagtatctcaagga
tttatggctaaaggtcttcatggagatatggagcaaagacaaagagaagaagctattaga
gcatttaaaacttctaagttagagattttaattgcaacggatgttgcagcaagagggctt
gatgtaaatgatgtgactcatgtatttaattatcatttaccatttgattctgaatcttat
gtacatagaattggtagaacaggacgtgctggaaaagaaggaatggcagtgtctattgta
actccacatgagtttagaatgcttcaaaaaattgagaaaaatattggtactaaattagaa
ggtagatctgttccaaatatcagttcagtaaaagagaaaaaagttactgatttaatgaat
aaaattaaagaacaagatatccaagattatgctttagcattagttgaggagctaaaagaa
gaatatgatatttcaactattgcttataaactagcatctatgatttcatcttctacttat
gtaaaaggtaataacaaaatcggtaaatcagaacaagatattcaaagattaattgaaaat
gctaataaatatggtgattcaaatggtcgagatagaaatagaggtggtagaggaagaggt
tctagaggtggttctagatatggtggttctagaaatagaaacgacagaagctctgataga
gaaagaagtggtggagattctagaagaagaaatagaagcggtgattctagaagaagaagg
gactaa
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