Malaciobacter pacificus: APAC_0253
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Entry
APAC_0253 CDS
T06712
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
apai
Malaciobacter pacificus
Pathway
apai00300
Lysine biosynthesis
apai00470
D-Amino acid metabolism
apai01100
Metabolic pathways
apai01110
Biosynthesis of secondary metabolites
apai01120
Microbial metabolism in diverse environments
apai01230
Biosynthesis of amino acids
Module
apai_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
apai00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
APAC_0253 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
APAC_0253 (lysA)
Enzymes [BR:
apai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
APAC_0253 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QEP33416
UniProt:
A0A5C2H873
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All DBs
Position
239289..240497
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AA seq
402 aa
AA seq
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MSINFKELANKYQTPYYVYDFDHITAQYNELKGAFKARKSLVAYAVKANSNLSVIKHLAS
LGAGADCVSIGEVKRALKVGIAPYKIIFSGVGKIDSEIKEALELGILMINVESDAELQRV
EAIAKELDVVARISIRVNPNIDPKTHPYISTGLHENKFGVDIDTAKRMYIQCKNSENLDP
QGIHCHIGSQLTELEPIKESVKIVADLVRNLKAIKIELSFMDIGGGLGIVYDDEKLIDTN
EYAQSVLETMFGLDITIICEPGRFLVGNCGTFVTKVLYEKVNGNKRFVIVDGAMNDLIRP
SLYNAYHKIEVLNDNKEFSDCNLVGPVCESGDFFAKNIDLPKTEHNDLIAIYSAGAYGFT
MASNYNTRGKVAEIAVENGVDRLIRKRETFEDLIALEEEFLK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagtattaattttaaagaattagcaaataaatatcaaacaccatattatgtatatgat
tttgaccatataacagcacaatacaacgagttaaagggtgcctttaaagcaagaaaatct
cttgttgcatatgcagttaaagcaaactcgaacttatcagtaattaagcatttagcatca
ttaggtgcaggagctgattgtgtaagtattggtgaagtaaaaagagcattaaaagttgga
attgctccatataaaatcattttctcaggtgttgggaaaattgattctgaaataaaagaa
gcattagaacttggtattttaatgattaatgttgaatcagatgcagaattacaaagagta
gaagcaattgcaaaagagttagatgttgttgcaagaatttcaattagagttaatccaaat
attgacccaaaaactcatccttatatttcaacaggattacatgagaataaatttggagtg
gatattgatacagcaaaaagaatgtatatccaatgtaaaaactctgaaaacttagatcct
caaggtattcactgtcatattggttctcagctaactgaacttgaaccaattaaagaatca
gtaaagattgttgctgatttagttagaaacttaaaagcaataaaaattgaactatctttt
atggatattggtggtggattaggtattgtttatgatgatgaaaaattaattgatacaaat
gaatatgcacaatcagttttagaaacaatgtttggtttagatattacaattatttgtgaa
ccaggtagattcttagtaggaaactgtggtacttttgtaactaaagttttatatgaaaaa
gtaaatgggaataaaagatttgttattgttgatggtgctatgaatgacttaattagacca
agtttatacaacgcatatcataaaattgaagttttaaatgataataaagagtttagtgat
tgtaatttagtgggtcctgtttgtgaaagtggtgacttctttgctaaaaatatagattta
ccaaaaacagaacataatgacttaattgcaatttattctgctggggcttatggatttaca
atggcaagtaactataacacaagagggaaagttgcggaaattgcagtagaaaatggtgta
gatagattaattagaaaaagagaaacttttgaagatttaattgctttagaagaagagttt
ttaaaataa
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