Malaciobacter pacificus: APAC_0278
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Entry
APAC_0278 CDS
T06712
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
apai
Malaciobacter pacificus
Brite
KEGG Orthology (KO) [BR:
apai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apai03016
]
APAC_0278 (truB)
Enzymes [BR:
apai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
APAC_0278 (truB)
Transfer RNA biogenesis [BR:
apai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
APAC_0278 (truB)
Prokaryotic type
APAC_0278 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QEP33440
UniProt:
A0A5C2H3A2
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All DBs
Position
267350..268204
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AA seq
284 aa
AA seq
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MQKKLYNKEPLNKLLVVNKPMFISSNSYLNKIKRKYKNKKAGFSGTLDPFAKGCLIVAFG
QYSKLFNYLSKTPKTYKAVIWLGATSESLDIENIIDINDERILNQDEVIKVINSMLGEIS
YTPPKFSAKKIDGKRAYDLARAGQEVEMKKSIMNIYDIKFLNYNHPFITFEATVSEGSYI
RSLAQLICDGLKVNGTLSYLERVNEGKFFFNNEKDLNPLDYIDLPIIKYNGTKEWLDNGK
KISIDYLDKKDNGKYIIVFDDFFSIIEIYENDVKYLLNKVTLNV
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaactttataataaagagccattaaataaattattggtagttaataaacca
atgtttattagttcaaattcatatttaaataaaataaaaagaaaatacaaaaataaaaaa
gcaggattttctggtactttagacccttttgcaaagggttgcttgattgttgcttttgga
caatactcaaaactttttaattatttatctaaaactccaaaaacatataaagcagttatt
tggctaggggctacatctgaatctttagatattgaaaatattattgatataaatgatgag
agaatattgaaccaagatgaagttataaaagtaataaattccatgctaggagagataagt
tatactcctccaaaatttagtgctaaaaaaatcgatggtaaaagagcttatgacttggca
agagctggtcaagaagttgaaatgaaaaaatcaattatgaacatttatgatataaagttt
ttaaattacaaccatccttttattacttttgaggctactgtaagtgagggtagttatatt
agatctttagcacaattaatatgtgatggattaaaggtcaatggaactttatcatattta
gaaagagttaatgaaggaaaattcttttttaataatgaaaaagatttaaaccctttagat
tatattgatttacctattattaaatataatggaactaaagagtggttagataatgggaaa
aaaatttcaattgattatttagataaaaaagataatggaaaatatataattgtatttgat
gactttttctctattattgaaatatatgaaaatgatgttaaatatttattaaataaggtt
acattaaatgtctga
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