Malaciobacter pacificus: APAC_0464
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Entry
APAC_0464 CDS
T06712
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
apai
Malaciobacter pacificus
Pathway
apai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
APAC_0464 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apai03400
]
APAC_0464 (xseA)
Enzymes [BR:
apai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
APAC_0464 (xseA)
DNA repair and recombination proteins [BR:
apai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
APAC_0464 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
SSB
Cupin_NOL9
Fe-ADH
HEAT_GCN1_C_2
POTRA_TamA_1
Motif
Other DBs
NCBI-ProteinID:
QEP33623
UniProt:
A0A5C2H4C1
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All DBs
Position
461639..462892
Genome browser
AA seq
417 aa
AA seq
DB search
MNSPISVTTLNTQIKSLLETTFIQVYVEGEISNLTYHNSGHIYFSIKDANSTISCVMFRG
NAKYLKFQLEVGQKINISGNITVYAPRGNYQLLCNKIEPSGKGALALAFEQLKEKLDAKG
YFKAEIKKTLPKYPKKIALVTSPTGAAIEDMKKVATHRWPLVEFILIPTLVQGEGSAFDI
SNSIKYADSLNCDVMIVGRGGGSIEDLWAFNEEIVANAIYEAKTPIISAVGHEVDYLISD
FVADVRAATPSNAIEIALPDINEHRMYLDNVSNEYQNRFNNILLNKQQKLTNLKTLFIQN
SIESKFEYIQSEIKMLKSSFRTDLIQKINSTQNELNLFNSTFKNSISSILSKSQSQLDLL
KSSYEMNHPDKKDKNGFVQISKENKIISMDTISIGDKIELQSPKYIATCTVNNLEKQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttgaactcaccaataagtgtaacaacactaaatacacaaattaaatcactactagaaacg
acttttattcaagtttatgttgagggtgaaatctctaatttaacttatcataattcaggg
catatatatttttcaataaaagatgcaaactctacaatctcatgtgtaatgtttagggga
aatgcaaagtatttaaagtttcaacttgaagttggacaaaaaattaatattagtggaaat
ataacagtatatgctccaaggggaaattatcaattattatgtaataaaattgaaccatca
ggaaagggtgcattagcacttgcatttgagcagttaaaagagaaacttgatgctaaagga
tactttaaggctgaaattaaaaaaacacttccaaaatatccaaagaaaattgcacttgta
acttctccaacaggtgctgctattgaagatatgaaaaaagtagcaacacatagatggcct
ttggtggagtttattttaatcccaactttagttcaaggtgagggttcggcttttgatatt
tcaaattctattaaatatgcagatagtttaaactgcgatgtgatgattgtaggaagaggt
ggcggaagtattgaagatctttgggcttttaatgaagaaatagtagcaaatgctatttat
gaggcaaaaacaccaattatatctgctgttggtcatgaggttgattatctaataagtgat
tttgtagcagatgttagagcagcaactccatcaaatgctattgaaatagcattgcctgat
ataaatgaacatagaatgtatttagataatgtttcaaatgaatatcaaaatagatttaat
aatattcttttaaataaacaacaaaaactcacaaacttaaaaacactctttattcaaaac
tctattgaaagtaaatttgagtatattcaaagtgaaattaaaatgttaaaatcatcattt
agaactgatttgattcaaaaaattaatagcacacaaaatgagttaaatctatttaattct
acatttaaaaactcaatctcttcgattttatctaaatcacaatcccaattagatttatta
aaatctagttatgaaatgaatcatcctgataaaaaagataaaaatggatttgtacagatt
tcaaaagaaaataaaataatttctatggatacaataagtattggtgataaaatagaactt
caaagtcccaaatatattgctacatgtactgtaaataacttagaaaaacaataa
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