Malaciobacter pacificus: APAC_0473
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Entry
APAC_0473 CDS
T06712
Symbol
groEL
Name
(GenBank) 60 kD chaperonin (cpn60)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
apai
Malaciobacter pacificus
Pathway
apai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APAC_0473 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apai03019
]
APAC_0473 (groEL)
03110 Chaperones and folding catalysts [BR:
apai03110
]
APAC_0473 (groEL)
03029 Mitochondrial biogenesis [BR:
apai03029
]
APAC_0473 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
apai04147
]
APAC_0473 (groEL)
Enzymes [BR:
apai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
APAC_0473 (groEL)
Messenger RNA biogenesis [BR:
apai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
APAC_0473 (groEL)
Chaperones and folding catalysts [BR:
apai03110
]
Heat shock proteins
HSP60 / Chaperonin
APAC_0473 (groEL)
Mitochondrial biogenesis [BR:
apai03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
APAC_0473 (groEL)
Exosome [BR:
apai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
APAC_0473 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
APAC_0473 (groEL)
Exosomal proteins of breast cancer cells
APAC_0473 (groEL)
Exosomal proteins of colorectal cancer cells
APAC_0473 (groEL)
Exosomal proteins of bladder cancer cells
APAC_0473 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
QEP33632
UniProt:
A0A5C2HBJ1
LinkDB
All DBs
Position
468010..469644
Genome browser
AA seq
544 aa
AA seq
DB search
MAKEISFSDSARNKLYSGVEKLADAVKVTMGPRGRNVLLQKAFGAPTITKDGVSVAREIE
LEDTLENMGAQLVKEVASKTADEAGDGTTTATVLAHSVFKEGLRNVTAGANPISLKRGMD
KACEAILANLKESSKVVANKTEIEQVATISANSDKAIGAMIAEAMDKVGKDGVITVEEAK
GIVDELDVVEGMQFDRGYLSPYFITNSEKMITEMDNPFILLYDKKISNLKEMLPILESVN
QSGRPLLIIAEDVDGEALATLVVNRLRGSLNIAAVKAPGFGDRRKAMLEDIAVLTNGTVV
SEELGMKLDTCGIDVLGSASKVVIDKDNTTIVDGNGTADAVTGRVNQIKAEMANTTSEYD
KEKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATRAAVEEGIVIGGGAALIR
AAAKVNLELDGDEQIGADIVLRAIKAPMKQIAINAGFDAGVVVNEVEKASSDNLGFNAAT
GEYVDMFEAGIVDPAKVERVAMQNAVSVASLLLTTEATVTDIKEEKSGPAMPDMGGMGGM
PGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagatttcatttagtgatagtgcaagaaataaattatactcaggtgttgaa
aaattagcagatgctgttaaagttacaatgggaccaagaggtagaaacgttttattacaa
aaagcttttggtgctccaacaattacaaaagatggtgtttctgttgcaagagaaattgaa
cttgaagatacattagaaaatatgggtgcacaacttgtaaaagaggttgcttctaaaact
gctgatgaagcaggagatggtactacaactgctacagttttagcacattcagtattcaaa
gaaggtttaagaaacgtaacagcaggtgctaacccaatttctttaaaaagaggtatggat
aaagcttgtgaagcaattttagctaacttaaaagagtcttctaaagttgttgctaataaa
actgagattgagcaagttgctacaatttctgcaaactctgataaagcaattggagctatg
attgctgaagcaatggataaagttggtaaagatggtgttattactgttgaagaagctaaa
ggtatcgttgatgaattagatgttgttgagggtatgcaatttgatagaggttacttatca
ccatactttattacaaactctgagaaaatgattactgaaatggataatccatttatttta
ttatatgacaaaaaaatctctaacttaaaagagatgttaccaattttagaatcagtaaat
caatcaggaagacctttattaatcattgctgaagatgttgatggtgaagcattagctact
ttagtagtaaatagattaagaggttctttaaatattgctgctgttaaagctcctggattt
ggtgatagaagaaaagctatgttagaagatatcgctgtattaacaaacggtactgttgta
tctgaagagttaggaatgaaacttgatacttgtggtattgatgtattaggaagtgcttct
aaagtagttattgataaagataatacaactattgttgatggaaatggaacagctgatgca
gtaactggaagagttaatcaaatcaaagctgaaatggctaatacaacttctgagtatgat
aaagaaaaattacaagaaagattagcaaaactttctggtggtgttgcagttatcaaagta
ggtgctgctactgaaactgaaatgaaagagaaaaaagatagagttgatgatgcactttct
gcaactagagctgctgttgaagaaggtattgttattggtggaggggctgcattaattaga
gctgctgctaaagtaaaccttgaattagatggtgatgagcaaattggtgcagatattgta
ttaagagctattaaagcacctatgaaacaaattgcaatcaatgctggatttgacgctggt
gttgttgtaaatgaagttgaaaaagcatctagtgataatttaggattcaacgctgcaact
ggtgagtatgtagatatgtttgaagctggtattgtagatcctgcaaaagttgaaagagta
gctatgcaaaatgcagtatcagttgcttcattattattaacaactgaagcaacagtaaca
gatattaaagaagaaaaatcaggtccagctatgccagatatgggtggaatgggcggaatg
ccaggaatgatgtag
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