Malaciobacter pacificus: APAC_0585
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Entry
APAC_0585 CDS
T06712
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apai
Malaciobacter pacificus
Pathway
apai03420
Nucleotide excision repair
apai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APAC_0585 (rep)
03430 Mismatch repair
APAC_0585 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apai03400
]
APAC_0585 (rep)
Enzymes [BR:
apai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APAC_0585 (rep)
DNA repair and recombination proteins [BR:
apai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APAC_0585 (rep)
MMR (mismatch excision repair)
Other MMR factors
APAC_0585 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEP33734
UniProt:
A0A5C2HA75
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All DBs
Position
574962..577016
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AA seq
684 aa
AA seq
DB search
MPLSNLNEEQLSAATCPSGYNLIIASAGTGKTSTIVGRIANLINSGVKPNEILLLTFTNK
AAAEMVQRVAKFFGKDIAKQIMAGTFHSVSYKLLKELNVNITLKQPSELKTLFRSVYEKR
VFYERQEDVNPYDGGYLYDMYSLFLNSNEGEDFATWIKNKNPDHELYTMIYEDVVDEFNQ
LKLKYGYANFDDLLTIMLTTLEEKEFDFKEILVDEYQDTNPLQGRLLDAFKPKSLFCVGD
YDQSIYAFNGSDIGIISTFAKRYNDAEVFTLRKNYRSTKPILDLATKVIEHNERVYEKKL
EVIRTESEYKPKLLAFNELFNQYHYISELISKSSTPHEEIAIIYRNNSSADGIETNLREY
NIPAKRKGGMSFFDSVEIKFIIDILVMQISHNDMMAFIHVIEHGKGIGKAIAKDIFDALI
KLGQGDLLEGLFHPDQNIKNPYETGRIKNVQLGLFDDFIELGSISKFKDCNFEEGFLSNP
ILKHPKLNVDGAKFLYDFYLLMKHLRRTKNPSTLVKSITSSMIYSKIKEFLSTKRATQKD
GTVNPMQKTKSLARLNRKVLLLINLSKNFNDLSKFINSMILGGGEMSEGEGVNLLSIHAS
KGLEFKEVYVIDLMDGRFPNRKLMSKGGSIEEERRLFYVAVTRAKDILYLSYAKYDKIKK
LTFVASPFLHEAGLIKEEKEEDSL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgccattatcaaatctaaatgaagaacaactaagtgcagccacatgtcctagtggatac
aatcttattatcgcaagtgcaggaacaggtaagacttctacaattgtaggaagaattgca
aacttaatcaatagtggtgtaaaaccaaatgaaattttattattaacttttacaaataaa
gcagctgctgaaatggttcaacgggttgctaaattttttggtaaagatatagccaaacaa
attatggctggaacttttcactctgtttcatataaattattaaaagagttaaatgtaaat
atcacattaaaacaaccaagtgagttgaaaacactttttagatcagtatatgaaaaaaga
gttttttatgaaagacaagaggatgtaaatccatatgatggtggatatttatatgatatg
tattcactttttttaaactcaaatgagggtgaagattttgctacttggattaagaataaa
aatccagatcatgaattatatactatgatttatgaagatgtagttgatgagtttaatcaa
ttaaaactaaaatatggatatgcaaatttcgatgatttattaactattatgttaacaact
ttggaagaaaaagagtttgattttaaagagatattagttgatgagtaccaagatacaaat
cctttacaaggtagacttttagatgcttttaaacctaaatcactattttgtgtaggtgat
tatgaccaaagtatttatgcttttaatggttcagatattggaattatttcaacatttgct
aaaagatataatgatgctgaagtttttacattaagaaaaaattatcgttcaacaaaacca
atattagatttagctacaaaggtaattgaacataatgaaagagtttatgaaaagaaactt
gaagttattagaactgagagtgaatataaacctaaacttttagcctttaatgaattattt
aatcaataccattacatttcagaactaatttcaaaaagctcaactccccatgaagaaata
gctattatatatagaaacaactcaagtgcagatggaattgaaacaaacttaagagagtac
aatataccagctaaaagaaaaggtggtatgagtttctttgattctgtagagataaaattt
attattgatattttagttatgcaaatttcccacaatgatatgatggcttttattcacgta
atagagcatggaaaagggattggaaaagcaatagcaaaagatatttttgatgctttaata
aaattaggacaaggtgatttattagaaggtttatttcatccagaccaaaatattaaaaat
ccctatgaaacaggaagaataaagaatgttcaattaggtctatttgatgattttatagaa
ttaggttctatttctaaattcaaagattgtaattttgaagaaggttttttgtcaaatcct
atattaaagcatccaaaattaaatgttgatggagctaagtttttatacgatttttatctt
ttaatgaaacatttaagaagaacaaaaaatccatcaacacttgttaaaagtattacttca
tctatgatttactcaaaaattaaagagtttttatctacaaaaagagcaactcaaaaagat
ggaacagtaaatcctatgcaaaaaacaaaatctttagcaagattaaatagaaaagttcta
cttttaataaatctttcaaaaaatttcaatgatttatccaaatttattaattcaatgatt
cttggtggtggggagatgagtgaaggtgaaggagttaatcttttatcaattcatgctagt
aaaggcctagaattcaaggaagtttacgttattgatttaatggatggaagatttcctaat
agaaaattaatgagtaaaggtggtagcatagaagaagagagaagacttttttatgttgca
gttactagagctaaagatatactatatttgagttatgcaaagtatgataaaatcaaaaaa
cttacctttgtagcaagtccttttttacatgaagcaggactgataaaagaagaaaaagaa
gaagattctttataa
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